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The map label for this gene is pdxT [H]

Identifier: 218234434

GI number: 218234434

Start: 19426

End: 20016

Strand: Direct

Name: pdxT [H]

Synonym: BCB4264_A0015

Alternate gene names: 218234434

Gene position: 19426-20016 (Clockwise)

Preceding gene: 218233181

Following gene: 218233674

Centisome position: 0.36

GC content: 41.12

Gene sequence:

>591_bases
ATGGTGAAAATCGGTGTACTAGGTCTTCAAGGTGCAGTTCGTGAGCATGTAAAATCAGTTGAAGCAAGTGGTGCAGAAGC
TGTTGTTGTAAAGCGTATAGAGCAACTTGAAGAGATTGATGGTCTTATTTTACCGGGCGGTGAAAGTACAACAATGCGCC
GTCTTATTGATAAGTATGCTTTCATGGAACCACTTCGTACATTTGCAAAGTCTGGTAAACCAATGTTTGGTACATGTGCA
GGGATGATTCTTCTTGCGAAAACACTTATTGGCTATGAAGAAGCACATATTGGTGCTATGGATATTACAGTTGAGCGCAA
TGCGTTCGGACGCCAAAAGGATAGTTTTGAGGCTGCGCTTTCAATTGAAGGTGTGGGTGAAGACTTCGTTGGTGTATTTA
TCCGTGCGCCGTATGTTGTAGAAGTAGCTGATAATGTTGAAGTGCTTTCTAAGCATGGTAACCGAATGGTAGCGGTAAGA
CAAGATCAGTTTTTAGCAGCTTCATTCCATCCGGAATTAACAGATGATCATCGTGTGACAGCATACTTTGTTGAAATGGT
AAAAGAAGCGAAAATGAAAAAAGTTGTATAA

Upstream 100 bases:

>100_bases
TAAAGGATTAGGTAATGCAATGAAGGGTGTCGAAATTTCAACGTTATTACCAGAACAACGCATGCAAGAGCGTGGATGGT
AATTAAAGGAGAACTTTAAA

Downstream 100 bases:

>100_bases
GTAACTTGCAACTTGTATAAGATTATAGTAAATTGATGGTAACAATTTTATAAAATAAGCGTGTTGATAGGAAATAGTAA
CAAATGTCGTTTCTTATAGA

Product: glutamine amidotransferase subunit PdxT

Products: NA

Alternate protein names: Glutamine amidotransferase glutaminase subunit pdxT [H]

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MVKIGVLGLQGAVREHVKSVEASGAEAVVVKRIEQLEEIDGLILPGGESTTMRRLIDKYAFMEPLRTFAKSGKPMFGTCA
GMILLAKTLIGYEEAHIGAMDITVERNAFGRQKDSFEAALSIEGVGEDFVGVFIRAPYVVEVADNVEVLSKHGNRMVAVR
QDQFLAASFHPELTDDHRVTAYFVEMVKEAKMKKVV

Sequences:

>Translated_196_residues
MVKIGVLGLQGAVREHVKSVEASGAEAVVVKRIEQLEEIDGLILPGGESTTMRRLIDKYAFMEPLRTFAKSGKPMFGTCA
GMILLAKTLIGYEEAHIGAMDITVERNAFGRQKDSFEAALSIEGVGEDFVGVFIRAPYVVEVADNVEVLSKHGNRMVAVR
QDQFLAASFHPELTDDHRVTAYFVEMVKEAKMKKVV
>Mature_196_residues
MVKIGVLGLQGAVREHVKSVEASGAEAVVVKRIEQLEEIDGLILPGGESTTMRRLIDKYAFMEPLRTFAKSGKPMFGTCA
GMILLAKTLIGYEEAHIGAMDITVERNAFGRQKDSFEAALSIEGVGEDFVGVFIRAPYVVEVADNVEVLSKHGNRMVAVR
QDQFLAASFHPELTDDHRVTAYFVEMVKEAKMKKVV

Specific function: Involved in the hydrolysis of glutamine to glutamate and ammonia. Channels an ammonia molecule to pdxS [H]

COG id: COG0311

COG function: function code H; Predicted glutamine amidotransferase involved in pyridoxine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine amidotransferase pdxT/SNO family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323995, Length=210, Percent_Identity=37.6190476190476, Blast_Score=111, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6321048, Length=210, Percent_Identity=36.6666666666667, Blast_Score=107, Evalue=9e-25,
Organism=Saccharomyces cerevisiae, GI6323742, Length=207, Percent_Identity=35.7487922705314, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002161
- InterPro:   IPR021196 [H]

Pfam domain/function: PF01174 SNO [H]

EC number: NA

Molecular weight: Translated: 21559; Mature: 21559

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS01236 PDXT_SNO_1 ; PS51130 PDXT_SNO_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIGVLGLQGAVREHVKSVEASGAEAVVVKRIEQLEEIDGLILPGGESTTMRRLIDKYA
CEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
FMEPLRTFAKSGKPMFGTCAGMILLAKTLIGYEEAHIGAMDITVERNAFGRQKDSFEAAL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECCCCCCCCCCHHHEE
SIEGVGEDFVGVFIRAPYVVEVADNVEVLSKHGNRMVAVRQDQFLAASFHPELTDDHRVT
EECCCCCHHHHHHHCCCEEEEECCCHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCHHH
AYFVEMVKEAKMKKVV
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKIGVLGLQGAVREHVKSVEASGAEAVVVKRIEQLEEIDGLILPGGESTTMRRLIDKYA
CEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
FMEPLRTFAKSGKPMFGTCAGMILLAKTLIGYEEAHIGAMDITVERNAFGRQKDSFEAAL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECCCCCCCCCCHHHEE
SIEGVGEDFVGVFIRAPYVVEVADNVEVLSKHGNRMVAVRQDQFLAASFHPELTDDHRVT
EECCCCCHHHHHHHCCCEEEEECCCHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCHHH
AYFVEMVKEAKMKKVV
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA