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The map label for this gene is yrkL [H]

Identifier: 218234118

GI number: 218234118

Start: 3304996

End: 3305529

Strand: Reverse

Name: yrkL [H]

Synonym: BCB4264_A3427

Alternate gene names: 218234118

Gene position: 3305529-3304996 (Counterclockwise)

Preceding gene: 218232243

Following gene: 218235868

Centisome position: 61.0

GC content: 31.84

Gene sequence:

>534_bases
ATGAAAACACTTGTAATTGTAGCACATCCTGATATTGAAAAATCAAAAATTAATAAAAGATGGATTGAAGAACTTGAGAA
ATATTCGGATGAAATTACGGTGCATGAATTGTATAAAGTGGCACCGAATTGGGAGTTTAATATTGAAGAAGAGCAAAAGT
TATTAGTAGAACATGACAGATATATATTTCAATTTCCGCTTTACTGGTACAGCTCACCACCATTATTAAAAAAATGGTTC
GATGATGTATTAACATATGGATTTGCGTACGGATCTAAAGGAGATAAAGTGAAGGGGAAAGAATTTGGTGTAGCTATTTC
TATAGGTGGATTAGAAAAAGACTATGAAAATAGTGGAATTACAATGGATGAGTTGACGAAACCATTCCAAGCTACATGCT
TATACACAGGTATGGAATTTATACCTTCCTTTTATTTATATGGTGCAGAATATAAACTAAGTGATGAAGAGATTGATAAA
AGTGCACCTGAGTATGTGCAATATGTGATGAACAAGAAGTATTCTAATATATAA

Upstream 100 bases:

>100_bases
GGTTCCTATAGCACTTTAAAGTACGTACTTTTCAATTATATGTGACTCATTCATACTAATACGTAAAGGGTTGAATAATT
TATAAAGGGGATGAAAAAAG

Downstream 100 bases:

>100_bases
TGGGAAATATCCATTTACTTGTAAAGTAAATGGATATTTTATATTCTTTTTATATTCACTAAGTGTAATCTTTAGTAAAT
TAATAGTTAATCTGGTAAAA

Product: NAD(P)H dehydrogenase, quinone family

Products: NAD(P); reduced acceptor [C]

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKTLVIVAHPDIEKSKINKRWIEELEKYSDEITVHELYKVAPNWEFNIEEEQKLLVEHDRYIFQFPLYWYSSPPLLKKWF
DDVLTYGFAYGSKGDKVKGKEFGVAISIGGLEKDYENSGITMDELTKPFQATCLYTGMEFIPSFYLYGAEYKLSDEEIDK
SAPEYVQYVMNKKYSNI

Sequences:

>Translated_177_residues
MKTLVIVAHPDIEKSKINKRWIEELEKYSDEITVHELYKVAPNWEFNIEEEQKLLVEHDRYIFQFPLYWYSSPPLLKKWF
DDVLTYGFAYGSKGDKVKGKEFGVAISIGGLEKDYENSGITMDELTKPFQATCLYTGMEFIPSFYLYGAEYKLSDEEIDK
SAPEYVQYVMNKKYSNI
>Mature_177_residues
MKTLVIVAHPDIEKSKINKRWIEELEKYSDEITVHELYKVAPNWEFNIEEEQKLLVEHDRYIFQFPLYWYSSPPLLKKWF
DDVLTYGFAYGSKGDKVKGKEFGVAISIGGLEKDYENSGITMDELTKPFQATCLYTGMEFIPSFYLYGAEYKLSDEEIDK
SAPEYVQYVMNKKYSNI

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=102, Percent_Identity=37.2549019607843, Blast_Score=68, Evalue=5e-12,
Organism=Escherichia coli, GI1786231, Length=168, Percent_Identity=34.5238095238095, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1789750, Length=173, Percent_Identity=33.5260115606936, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 20810; Mature: 20810

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLVIVAHPDIEKSKINKRWIEELEKYSDEITVHELYKVAPNWEFNIEEEQKLLVEHDR
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCC
YIFQFPLYWYSSPPLLKKWFDDVLTYGFAYGSKGDKVKGKEFGVAISIGGLEKDYENSGI
EEEEEEHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
TMDELTKPFQATCLYTGMEFIPSFYLYGAEYKLSDEEIDKSAPEYVQYVMNKKYSNI
CHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTLVIVAHPDIEKSKINKRWIEELEKYSDEITVHELYKVAPNWEFNIEEEQKLLVEHDR
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCC
YIFQFPLYWYSSPPLLKKWFDDVLTYGFAYGSKGDKVKGKEFGVAISIGGLEKDYENSGI
EEEEEEHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
TMDELTKPFQATCLYTGMEFIPSFYLYGAEYKLSDEEIDKSAPEYVQYVMNKKYSNI
CHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NAD(P)H2; acceptor [C]

Specific reaction: NAD(P)H2 + acceptor = NAD(P) + reduced acceptor [C]

General reaction: Oxidoreductases; Acting on NADH or NADPH; With other acceptors [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]