Click here to switch to the map view.

The map label for this gene is lctB [H]

Identifier: 218234099

GI number: 218234099

Start: 523807

End: 524211

Strand: Direct

Name: lctB [H]

Synonym: BCB4264_A0540

Alternate gene names: 218234099

Gene position: 523807-524211 (Clockwise)

Preceding gene: 218234830

Following gene: 218236119

Centisome position: 9.67

GC content: 35.56

Gene sequence:

>405_bases
ATGTTATGGGGATTTATTCTATTAATTGCAGCAATCGCTATTTTGAAAAGTGTCCAATTATTATGGAGTTCCTATTCGGA
TTCAACGCGTTTTTTTTCGCTCTATAATTTGGCCACATTATTTTTAATCTATACAACAGTACTAATCGCATTTGGATTAA
GTTACGTTGTATTAGAGGAAATGGGTTTCGCAGTTTTGAAAGAGGACGGAGAAAGTTTGAACGCTCATTCTTTTCAACTC
GTCGAAGTTTGTTTATATTTTAGCGCAGTTACTTTATTGTCTGTTGGATATGGTGACATATCTCCGATTGGAATTGGGCG
ATGGATTGCAATCGCAGAAGCGCTAATTGGATATACACTCCCTTTTGCTTTTGTGATGAGGTCTGTAATAGACAATGAAA
AATAA

Upstream 100 bases:

>100_bases
AAAAAGGTATCGTGGCGCGGGTAATTAATTATAGAAGCTTGTTCGTTTCTAAGGGATAAATCAGTTCTCCACCTCATACA
TATAAAATGAGGTGGAGGAC

Downstream 100 bases:

>100_bases
GGAAGCATTTGTTATAGTAAAGGAAAAGAGTAGGAGTGATAACTATGATTACAGTAGGAGAAATGGCACCAGAATTCACA
TTAGAGGGAAGTAATGGAGA

Product: putative potassium channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MLWGFILLIAAIAILKSVQLLWSSYSDSTRFFSLYNLATLFLIYTTVLIAFGLSYVVLEEMGFAVLKEDGESLNAHSFQL
VEVCLYFSAVTLLSVGYGDISPIGIGRWIAIAEALIGYTLPFAFVMRSVIDNEK

Sequences:

>Translated_134_residues
MLWGFILLIAAIAILKSVQLLWSSYSDSTRFFSLYNLATLFLIYTTVLIAFGLSYVVLEEMGFAVLKEDGESLNAHSFQL
VEVCLYFSAVTLLSVGYGDISPIGIGRWIAIAEALIGYTLPFAFVMRSVIDNEK
>Mature_134_residues
MLWGFILLIAAIAILKSVQLLWSSYSDSTRFFSLYNLATLFLIYTTVLIAFGLSYVVLEEMGFAVLKEDGESLNAHSFQL
VEVCLYFSAVTLLSVGYGDISPIGIGRWIAIAEALIGYTLPFAFVMRSVIDNEK

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013099 [H]

Pfam domain/function: PF07885 Ion_trans_2 [H]

EC number: NA

Molecular weight: Translated: 14878; Mature: 14878

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWGFILLIAAIAILKSVQLLWSSYSDSTRFFSLYNLATLFLIYTTVLIAFGLSYVVLEE
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGFAVLKEDGESLNAHSFQLVEVCLYFSAVTLLSVGYGDISPIGIGRWIAIAEALIGYTL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
PFAFVMRSVIDNEK
HHHHHHHHHHCCCC
>Mature Secondary Structure
MLWGFILLIAAIAILKSVQLLWSSYSDSTRFFSLYNLATLFLIYTTVLIAFGLSYVVLEE
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGFAVLKEDGESLNAHSFQLVEVCLYFSAVTLLSVGYGDISPIGIGRWIAIAEALIGYTL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
PFAFVMRSVIDNEK
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3029705 [H]