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The map label for this gene is SASP-C5 [H]

Identifier: 218234063

GI number: 218234063

Start: 3006290

End: 3006520

Strand: Reverse

Name: SASP-C5 [H]

Synonym: BCB4264_A3129

Alternate gene names: 218234063

Gene position: 3006520-3006290 (Counterclockwise)

Preceding gene: 218230779

Following gene: 218235006

Centisome position: 55.48

GC content: 32.9

Gene sequence:

>231_bases
ATGTTATTTATAAATATTCAAAGATACGAAAGTAATATAAATGAAATTCTTATTTCTGCTACTACAAGTACTATTGAGCA
AATGAAGTATGAAATTGCTTTTGAACTAGGAGTCACACTGGGACCTGATACATCACATCATCTGCAAATGGTTCGAATCG
GTGGAGAGATTACAAAACGCTTAGTTCGAATGGCTGAAAAACAGTTAACAGGTCAATACAGATTACACTAA

Upstream 100 bases:

>100_bases
TGTTTCAAATTTAATTGGTGAAATAAGGGGAGGGAAAGGGTTCCTATAAAAATACTGGAATAAATTAGGTTATTCATGCG
TAAATAGCATAATTAGGTAC

Downstream 100 bases:

>100_bases
GAAAATAATCCGTATATATACGGATTATTTTTCCTTTAATTACAAAAAAATAAATTTCGAAATTGAAAAAACCTCTCATA
TTCCTTTGTAATAAACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: SASP [H]

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MLFINIQRYESNINEILISATTSTIEQMKYEIAFELGVTLGPDTSHHLQMVRIGGEITKRLVRMAEKQLTGQYRLH

Sequences:

>Translated_76_residues
MLFINIQRYESNINEILISATTSTIEQMKYEIAFELGVTLGPDTSHHLQMVRIGGEITKRLVRMAEKQLTGQYRLH
>Mature_76_residues
MLFINIQRYESNINEILISATTSTIEQMKYEIAFELGVTLGPDTSHHLQMVRIGGEITKRLVRMAEKQLTGQYRLH

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 8778; Mature: 8778

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS00304 SASP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFINIQRYESNINEILISATTSTIEQMKYEIAFELGVTLGPDTSHHLQMVRIGGEITKR
CEEEEEEHHHCCHHHEEEECHHHHHHHHHHHHHEEECCEECCCCCHHEEEEEECHHHHHH
LVRMAEKQLTGQYRLH
HHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLFINIQRYESNINEILISATTSTIEQMKYEIAFELGVTLGPDTSHHLQMVRIGGEITKR
CEEEEEEHHHCCHHHEEEECHHHHHHHHHHHHHEEECCEECCCCCHHEEEEEECHHHHHH
LVRMAEKQLTGQYRLH
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3080406 [H]