Click here to switch to the map view.

The map label for this gene is 218234049

Identifier: 218234049

GI number: 218234049

Start: 3514757

End: 3515494

Strand: Reverse

Name: 218234049

Synonym: BCB4264_A3608

Alternate gene names: NA

Gene position: 3515494-3514757 (Counterclockwise)

Preceding gene: 218233309

Following gene: 218232115

Centisome position: 64.87

GC content: 35.77

Gene sequence:

>738_bases
ATGAAAACAAAAATCAAAAAGGGAAAAATAATACAGAACTGTTTAAAAGTCACGGCAGCAACCGTAGTGGCTAGCGGTGT
AGGATTTCAATTTTATGAGATTCAAGAGTTAAACAAAGAAGTGAAATCCTTAGAGAAAAACCATAAACAAACTGTCCTAG
AATTAAAAACCGCGAATGAAAACAACAAAGTATTAGAAGAACAAAAAAAACAAATTGCAGCTAATACAGAACAGCTTTCT
ATTGAATTAGAAGAAATAAAAAATGAAAACGAAGCTATGAATGAGGGGAAACATCAGTCTCAAGAAGAGAATCAGAAACT
TCAAGCAGAGAATGCAGATTTAGCTAAGCAATTGCGCGAAGCGAAGGAATCTGCCAGGCCAGTGATGCCTGAAAAAACAT
CATCAGACAAATCTGATCCTCCTACTGCTAAAGATACTAGTGTTTCTAAAACGATTATGGGGATTGGTACTGCTTATACA
TTAAACGAGCCAGGAGTTACAGGTATAACAGCTTCAGGTAAGACAATACAACCAGGTATGATTGCAATGGATCGCTCGGT
TCCAATGGGAACAAGAGTAAGAATTACATGTGATTCTTATCCATATATTAATGGAATTTACACTGTCGAAGATCGAGGTG
GTGCTATAAAAGGAAACATAGTAGACATTTATATGACAGATGCTGACAGAATGAATGACTTTGGACGAAGAGATATCAAG
ATAGAATTTCTTAACTAG

Upstream 100 bases:

>100_bases
TTTTAGGAGGGCTCTTTTTTATTTTACTTCTCTATAAAAACTTCTAACCTTCTCACTACTGTAACAACAGAAATATAATA
ATGAGAGGACTTGATTCAAA

Downstream 100 bases:

>100_bases
TTGATGATATGGATATCATTGGGCACGGTTGCTGAGAAAATCAGGAGAACATTAGAAGGAAAAGCAATTTTGGTATAACT
ATTATTTAGGTAAACAAACT

Product: LysM domain protein, putative

Products: NA

Alternate protein names: LysM Domain Protein

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKTKIKKGKIIQNCLKVTAATVVASGVGFQFYEIQELNKEVKSLEKNHKQTVLELKTANENNKVLEEQKKQIAANTEQLS
IELEEIKNENEAMNEGKHQSQEENQKLQAENADLAKQLREAKESARPVMPEKTSSDKSDPPTAKDTSVSKTIMGIGTAYT
LNEPGVTGITASGKTIQPGMIAMDRSVPMGTRVRITCDSYPYINGIYTVEDRGGAIKGNIVDIYMTDADRMNDFGRRDIK
IEFLN

Sequences:

>Translated_245_residues
MKTKIKKGKIIQNCLKVTAATVVASGVGFQFYEIQELNKEVKSLEKNHKQTVLELKTANENNKVLEEQKKQIAANTEQLS
IELEEIKNENEAMNEGKHQSQEENQKLQAENADLAKQLREAKESARPVMPEKTSSDKSDPPTAKDTSVSKTIMGIGTAYT
LNEPGVTGITASGKTIQPGMIAMDRSVPMGTRVRITCDSYPYINGIYTVEDRGGAIKGNIVDIYMTDADRMNDFGRRDIK
IEFLN
>Mature_245_residues
MKTKIKKGKIIQNCLKVTAATVVASGVGFQFYEIQELNKEVKSLEKNHKQTVLELKTANENNKVLEEQKKQIAANTEQLS
IELEEIKNENEAMNEGKHQSQEENQKLQAENADLAKQLREAKESARPVMPEKTSSDKSDPPTAKDTSVSKTIMGIGTAYT
LNEPGVTGITASGKTIQPGMIAMDRSVPMGTRVRITCDSYPYINGIYTVEDRGGAIKGNIVDIYMTDADRMNDFGRRDIK
IEFLN

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27215; Mature: 27215

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKIKKGKIIQNCLKVTAATVVASGVGFQFYEIQELNKEVKSLEKNHKQTVLELKTANE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHEEEEEEECCC
NNKVLEEQKKQIAANTEQLSIELEEIKNENEAMNEGKHQSQEENQKLQAENADLAKQLRE
CCHHHHHHHHHHHCCHHHEEEEHHHHCCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHH
AKESARPVMPEKTSSDKSDPPTAKDTSVSKTIMGIGTAYTLNEPGVTGITASGKTIQPGM
HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCEEECCCCEECCCE
IAMDRSVPMGTRVRITCDSYPYINGIYTVEDRGGAIKGNIVDIYMTDADRMNDFGRRDIK
EEECCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEECCEEEEEECCHHHHHHCCCCEEE
IEFLN
EEEEC
>Mature Secondary Structure
MKTKIKKGKIIQNCLKVTAATVVASGVGFQFYEIQELNKEVKSLEKNHKQTVLELKTANE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHEEEEEEECCC
NNKVLEEQKKQIAANTEQLSIELEEIKNENEAMNEGKHQSQEENQKLQAENADLAKQLRE
CCHHHHHHHHHHHCCHHHEEEEHHHHCCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHH
AKESARPVMPEKTSSDKSDPPTAKDTSVSKTIMGIGTAYTLNEPGVTGITASGKTIQPGM
HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCEEECCCCEECCCE
IAMDRSVPMGTRVRITCDSYPYINGIYTVEDRGGAIKGNIVDIYMTDADRMNDFGRRDIK
EEECCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEECCEEEEEECCHHHHHHCCCCEEE
IEFLN
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA