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The map label for this gene is oppB [H]

Identifier: 218233900

GI number: 218233900

Start: 1201998

End: 1202927

Strand: Direct

Name: oppB [H]

Synonym: BCB4264_A1235

Alternate gene names: 218233900

Gene position: 1201998-1202927 (Clockwise)

Preceding gene: 218234625

Following gene: 218236056

Centisome position: 22.18

GC content: 37.74

Gene sequence:

>930_bases
ATGGGACGTTATGTATTAAAACGTTTCGTGTACATGGCTTTGACATTATTTTTAATTACTACACTGACTTTCTTTTTGAT
GAAATTACTTCCGGGTTCTCCGCTTAAAAACCAGGAGAAGCTATCACCGGCACAAAAAGAAATCATTCTTGAAAAATACG
GATTGAATGATCCGGTACCAGTTCAATACGCACGTTACTTAGGTAACCTAGCAAAAGGTGATTTAGGGGTATCATTCCAA
TATGATAACCGCCCAGTAACAGACATGATTGTGGATCGTATTGGACCATCAGCCCAATTAGGTTTACAAGCGATTATATT
AGGAACATTTATCGGTTTAATTTTAGGTATTGTTGCCGCACTTCGTAATAATACGTGGGTAGATTATAGTGCAACAGTTA
TTTCGGTACTCGGAATGTCGGTACCATCATTCGTATTCGCCGCATTACTGCAATATTTCGTAGGGGTAAAACTTGGCTGG
TTCCCAGTAGCATTCTGGAAAGGACCAGAGTTTACTGTAATGCCTACAATTGCATTATCGATGGGAGTTATTGCAACAAT
CGCACGTTTCTCTCGTGCAGAATTAATTGAAGTTATGCAAGCCGATTACATTTTAACAGCGAAAGCGAAAGGAATTAGCC
AAGGCGTTATCATTGTCAAACATGCACTTCGTAACGCGTTAATTCCAGTTGTAACAATTTTAGGACCAATGGTTGCGGCA
TTAATTACAGGAACACTTGTTATCGAGCAAATTTATGCTGTACCAGGACTTGGGGAACAATTCGTTAAATCGATTACTTT
AAATGACTATACAGTTATTATGGGAACTACGATTTTCTATAGTGCAATCTTCATTTTAGTTATTTTCATTGTAGATATTT
TATACGGAATTATTGATCCTCGTATTCGTTTAGCGGGAGGGAAAAAATGA

Upstream 100 bases:

>100_bases
ATATGCCTATGATGGGCATATGCTCTTATTTTAAAAAAATAAAAGTAAGAATATTTTAAACTATCTTATTGCTTTTGAGA
AAAACGGGGAGGTGCTTGAT

Downstream 100 bases:

>100_bases
TGAAAGATGTACAAAAATTATCTCCAGATTTATTTCAACAAGCCAATCAAAATAATGTTGATAATGAAGTCATTGCCCGT
CCAAGCCTAACGTTTTGGCA

Product: oligopeptide ABC transporter, permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MGRYVLKRFVYMALTLFLITTLTFFLMKLLPGSPLKNQEKLSPAQKEIILEKYGLNDPVPVQYARYLGNLAKGDLGVSFQ
YDNRPVTDMIVDRIGPSAQLGLQAIILGTFIGLILGIVAALRNNTWVDYSATVISVLGMSVPSFVFAALLQYFVGVKLGW
FPVAFWKGPEFTVMPTIALSMGVIATIARFSRAELIEVMQADYILTAKAKGISQGVIIVKHALRNALIPVVTILGPMVAA
LITGTLVIEQIYAVPGLGEQFVKSITLNDYTVIMGTTIFYSAIFILVIFIVDILYGIIDPRIRLAGGKK

Sequences:

>Translated_309_residues
MGRYVLKRFVYMALTLFLITTLTFFLMKLLPGSPLKNQEKLSPAQKEIILEKYGLNDPVPVQYARYLGNLAKGDLGVSFQ
YDNRPVTDMIVDRIGPSAQLGLQAIILGTFIGLILGIVAALRNNTWVDYSATVISVLGMSVPSFVFAALLQYFVGVKLGW
FPVAFWKGPEFTVMPTIALSMGVIATIARFSRAELIEVMQADYILTAKAKGISQGVIIVKHALRNALIPVVTILGPMVAA
LITGTLVIEQIYAVPGLGEQFVKSITLNDYTVIMGTTIFYSAIFILVIFIVDILYGIIDPRIRLAGGKK
>Mature_308_residues
GRYVLKRFVYMALTLFLITTLTFFLMKLLPGSPLKNQEKLSPAQKEIILEKYGLNDPVPVQYARYLGNLAKGDLGVSFQY
DNRPVTDMIVDRIGPSAQLGLQAIILGTFIGLILGIVAALRNNTWVDYSATVISVLGMSVPSFVFAALLQYFVGVKLGWF
PVAFWKGPEFTVMPTIALSMGVIATIARFSRAELIEVMQADYILTAKAKGISQGVIIVKHALRNALIPVVTILGPMVAAL
ITGTLVIEQIYAVPGLGEQFVKSITLNDYTVIMGTTIFYSAIFILVIFIVDILYGIIDPRIRLAGGKK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=305, Percent_Identity=41.6393442622951, Blast_Score=249, Evalue=1e-67,
Organism=Escherichia coli, GI1787053, Length=305, Percent_Identity=36.0655737704918, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=31.4540059347181, Blast_Score=179, Evalue=1e-46,
Organism=Escherichia coli, GI1789888, Length=314, Percent_Identity=31.5286624203822, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1787761, Length=333, Percent_Identity=30.3303303303303, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=24.7252747252747, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1787550, Length=266, Percent_Identity=25.9398496240602, Blast_Score=108, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33872; Mature: 33741

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRYVLKRFVYMALTLFLITTLTFFLMKLLPGSPLKNQEKLSPAQKEIILEKYGLNDPVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCH
VQYARYLGNLAKGDLGVSFQYDNRPVTDMIVDRIGPSAQLGLQAIILGTFIGLILGIVAA
HHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRNNTWVDYSATVISVLGMSVPSFVFAALLQYFVGVKLGWFPVAFWKGPEFTVMPTIALS
HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCEEEEEECCCCEEEHHHHHHH
MGVIATIARFSRAELIEVMQADYILTAKAKGISQGVIIVKHALRNALIPVVTILGPMVAA
HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LITGTLVIEQIYAVPGLGEQFVKSITLNDYTVIMGTTIFYSAIFILVIFIVDILYGIIDP
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIRLAGGKK
CEEECCCCC
>Mature Secondary Structure 
GRYVLKRFVYMALTLFLITTLTFFLMKLLPGSPLKNQEKLSPAQKEIILEKYGLNDPVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCH
VQYARYLGNLAKGDLGVSFQYDNRPVTDMIVDRIGPSAQLGLQAIILGTFIGLILGIVAA
HHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRNNTWVDYSATVISVLGMSVPSFVFAALLQYFVGVKLGWFPVAFWKGPEFTVMPTIALS
HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCEEEEEECCCCEEEHHHHHHH
MGVIATIARFSRAELIEVMQADYILTAKAKGISQGVIIVKHALRNALIPVVTILGPMVAA
HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LITGTLVIEQIYAVPGLGEQFVKSITLNDYTVIMGTTIFYSAIFILVIFIVDILYGIIDP
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIRLAGGKK
CEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]