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The map label for this gene is yisU [H]

Identifier: 218233895

GI number: 218233895

Start: 1905143

End: 1905760

Strand: Reverse

Name: yisU [H]

Synonym: BCB4264_A1991

Alternate gene names: 218233895

Gene position: 1905760-1905143 (Counterclockwise)

Preceding gene: 218231930

Following gene: 218231657

Centisome position: 35.17

GC content: 34.95

Gene sequence:

>618_bases
ATGATGAGTGAAGCAATTATTCATGGTATCATTCTTGCATTTGGACTTATCATTCCATTAGGTGTACAAAATGTTTTTGT
CTTTAACCAAGGTGCGAGCCAACCAAACATTTGGAGAGCAGCCCCCGTAATATTAACTGCCTCTATATGTGATACGTTAC
TCATATTGATTGCAGTGCAAGGTGTCTCCCTTGTACTCCTTACTTTTTCTTGGCTAACTAACTCGTTATATATAGTTGGA
TTTTTCTTTCTCCTATACATGGGCTTTGTTATTTGGAGAAGTAACCCTTCCAACGATGTAAAACAAGAAAAAAGTATGCC
CTTAAAAAAGCAAATCCTTTTCGCAGCATCCGTTTCGTTATTAAATCCACATGCTATTTTAGACACAATCGGTGTAATTG
GAACAAATTCTATTCAATACATAGGAAGTGAAAAATGGGCTTTCACACTTGCAACTATTATCGTTTCTTGGATTTGGTTT
ATAAGCTTAGCGTTAGCGGGGAAATTTCTAAAAAGACTAGACTCAACCGGAAAGACAATTTTATTATTAAATAAATTTTC
TGGTCTCATCATATGGGGTGTCGCGCTTTATATGTTAAAACAAGTTATTTATTCTTAA

Upstream 100 bases:

>100_bases
TCTTTTTGGTTGGTAATCTCCCCAACCATATGGATGGATACAAATTTTCATTTCTTCTATACAATATACACTATCATAAT
GAATTAAAATAGGAGGTAAT

Downstream 100 bases:

>100_bases
TGAACGAAAGAGAATTGCATGTTACTCAAAACATCATGCAATTCTCTTACAAATTATGAAGTAGGCTCTGGTTTCTGTTT
TACCGTCTTTGCATCCTTTG

Product: lysE/yggA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MMSEAIIHGIILAFGLIIPLGVQNVFVFNQGASQPNIWRAAPVILTASICDTLLILIAVQGVSLVLLTFSWLTNSLYIVG
FFFLLYMGFVIWRSNPSNDVKQEKSMPLKKQILFAASVSLLNPHAILDTIGVIGTNSIQYIGSEKWAFTLATIIVSWIWF
ISLALAGKFLKRLDSTGKTILLLNKFSGLIIWGVALYMLKQVIYS

Sequences:

>Translated_205_residues
MMSEAIIHGIILAFGLIIPLGVQNVFVFNQGASQPNIWRAAPVILTASICDTLLILIAVQGVSLVLLTFSWLTNSLYIVG
FFFLLYMGFVIWRSNPSNDVKQEKSMPLKKQILFAASVSLLNPHAILDTIGVIGTNSIQYIGSEKWAFTLATIIVSWIWF
ISLALAGKFLKRLDSTGKTILLLNKFSGLIIWGVALYMLKQVIYS
>Mature_205_residues
MMSEAIIHGIILAFGLIIPLGVQNVFVFNQGASQPNIWRAAPVILTASICDTLLILIAVQGVSLVLLTFSWLTNSLYIVG
FFFLLYMGFVIWRSNPSNDVKQEKSMPLKKQILFAASVSLLNPHAILDTIGVIGTNSIQYIGSEKWAFTLATIIVSWIWF
ISLALAGKFLKRLDSTGKTILLLNKFSGLIIWGVALYMLKQVIYS

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=201, Percent_Identity=32.8358208955224, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22698; Mature: 22698

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSEAIIHGIILAFGLIIPLGVQNVFVFNQGASQPNIWRAAPVILTASICDTLLILIAVQ
CCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
GVSLVLLTFSWLTNSLYIVGFFFLLYMGFVIWRSNPSNDVKQEKSMPLKKQILFAASVSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHH
LNPHAILDTIGVIGTNSIQYIGSEKWAFTLATIIVSWIWFISLALAGKFLKRLDSTGKTI
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LLLNKFSGLIIWGVALYMLKQVIYS
EEEECCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMSEAIIHGIILAFGLIIPLGVQNVFVFNQGASQPNIWRAAPVILTASICDTLLILIAVQ
CCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
GVSLVLLTFSWLTNSLYIVGFFFLLYMGFVIWRSNPSNDVKQEKSMPLKKQILFAASVSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHH
LNPHAILDTIGVIGTNSIQYIGSEKWAFTLATIIVSWIWFISLALAGKFLKRLDSTGKTI
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LLLNKFSGLIIWGVALYMLKQVIYS
EEEECCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]