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The map label for this gene is ygaJ [H]

Identifier: 218233778

GI number: 218233778

Start: 1694696

End: 1695394

Strand: Reverse

Name: ygaJ [H]

Synonym: BCB4264_A1788

Alternate gene names: 218233778

Gene position: 1695394-1694696 (Counterclockwise)

Preceding gene: 218233568

Following gene: 218232060

Centisome position: 31.29

GC content: 33.62

Gene sequence:

>699_bases
ATGAAATTAGCTGTCATTGGTGGCGGTGATTTACAAGATTCAAATCACTTGCCTATTAATGAACGCCTTATAGAATTAAC
AAATAAACAGTACCCAAAAATATTGTTTATTCCAACGGCTAGTCATGATGATGAAAGCTATATAAAATTATTTTTAGACA
CGTTTGAAAAACAATTACATTGTGAAGTACAAATTTTACGCATTACAACAGATTCACCTTCTAAGTATGAAATAGACGAG
ATGATTCATTCAGCCGATTTAATTTATCTAGGTGGCGGGAACTATATTCACATGCTTACGCAATGGAAAGAACATAGACT
CGATGAAAAATTATTATTGGCTCTGCAACAAGGAACACTTATTGCTGGTTATAGCGCTGGTGCTATGTGTTGGTTCACGT
CTAGTATCCGATCAGATTATGAGGGTTCTGGTTATATAGAGAGTAACGGTTGGGGAATTGTTAATAAAAGATTCTGTCCA
CATTATAATCAATTAAACAGAATGAACGCCTTCCATTCCTTTTTACAAAATCATCAAGGGAATATAGAAGGAATTGCACT
GGAGGATAATTGCGCTTTATATATTACAGAGGAATCCTTTGAGATTATCGGTGAATCGGAAAAAGCATGGGAGTTTTATA
TGAGTGATAAAACACTCATTAGACAACATTTTGATATAACTTTAAAAAGCTATTTGTAA

Upstream 100 bases:

>100_bases
CTTAAGCTACATTTTCTAATTATTGATTACATTACGGAAGGAATGTAACTCTCTTCTATCGAATTTTTATATAACAAAAA
TAATTAGGTGGTGCTTTACT

Downstream 100 bases:

>100_bases
ACCTGCACTTACGAAAAAATGTCCCTAAGTCTAATAACTTAGGGACATTTTTCTATTTAACTAACTAATCGTGTAATTCG
TTTCTTTTGCCATGAAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKLAVIGGGDLQDSNHLPINERLIELTNKQYPKILFIPTASHDDESYIKLFLDTFEKQLHCEVQILRITTDSPSKYEIDE
MIHSADLIYLGGGNYIHMLTQWKEHRLDEKLLLALQQGTLIAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCP
HYNQLNRMNAFHSFLQNHQGNIEGIALEDNCALYITEESFEIIGESEKAWEFYMSDKTLIRQHFDITLKSYL

Sequences:

>Translated_232_residues
MKLAVIGGGDLQDSNHLPINERLIELTNKQYPKILFIPTASHDDESYIKLFLDTFEKQLHCEVQILRITTDSPSKYEIDE
MIHSADLIYLGGGNYIHMLTQWKEHRLDEKLLLALQQGTLIAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCP
HYNQLNRMNAFHSFLQNHQGNIEGIALEDNCALYITEESFEIIGESEKAWEFYMSDKTLIRQHFDITLKSYL
>Mature_232_residues
MKLAVIGGGDLQDSNHLPINERLIELTNKQYPKILFIPTASHDDESYIKLFLDTFEKQLHCEVQILRITTDSPSKYEIDE
MIHSADLIYLGGGNYIHMLTQWKEHRLDEKLLLALQQGTLIAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCP
HYNQLNRMNAFHSFLQNHQGNIEGIALEDNCALYITEESFEIIGESEKAWEFYMSDKTLIRQHFDITLKSYL

Specific function: Unknown

COG id: COG3340

COG function: function code E; Peptidase E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: 3.4.11.2

Molecular weight: Translated: 26739; Mature: 26739

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAVIGGGDLQDSNHLPINERLIELTNKQYPKILFIPTASHDDESYIKLFLDTFEKQLH
CEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEE
CEVQILRITTDSPSKYEIDEMIHSADLIYLGGGNYIHMLTQWKEHRLDEKLLLALQQGTL
EEEEEEEEECCCCCCEEHHHHHCCCCEEEECCCCEEEEEHHHHHHCCCHHHHEEECCCCE
IAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCPHYNQLNRMNAFHSFLQNHQG
EEECCCCEEEEEEHHHHCCCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCC
NIEGIALEDNCALYITEESFEIIGESEKAWEFYMSDKTLIRQHFDITLKSYL
CEEEEEEECCEEEEEECCCEEEECCCCHHEEEEECCHHHHHHHHCEEEECCC
>Mature Secondary Structure
MKLAVIGGGDLQDSNHLPINERLIELTNKQYPKILFIPTASHDDESYIKLFLDTFEKQLH
CEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEE
CEVQILRITTDSPSKYEIDEMIHSADLIYLGGGNYIHMLTQWKEHRLDEKLLLALQQGTL
EEEEEEEEECCCCCCEEHHHHHCCCCEEEECCCCEEEEEHHHHHHCCCHHHHEEECCCCE
IAGYSAGAMCWFTSSIRSDYEGSGYIESNGWGIVNKRFCPHYNQLNRMNAFHSFLQNHQG
EEECCCCEEEEEEHHHHCCCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCC
NIEGIALEDNCALYITEESFEIIGESEKAWEFYMSDKTLIRQHFDITLKSYL
CEEEEEEECCEEEEEECCCEEEECCCCHHEEEEECCHHHHHHHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]