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The map label for this gene is yrkO [H]

Identifier: 218233743

GI number: 218233743

Start: 1547468

End: 1548631

Strand: Reverse

Name: yrkO [H]

Synonym: BCB4264_A1628

Alternate gene names: 218233743

Gene position: 1548631-1547468 (Counterclockwise)

Preceding gene: 218235878

Following gene: 218233247

Centisome position: 28.58

GC content: 34.71

Gene sequence:

>1164_bases
ATGACACAAAATCTCACACAAGGCGAGAGGATACACTCCATTGATGTTATTAGAGGAATAGCTGTACTAGGTATTTTTCT
TGTGAATTGGCCTGTTATCGCCGGGGTTGACTCACGTGATCTTTCAGGAATTTACGAAGGGATAGACAGCTACATTCGCC
TATTTTACGATATGTTTATTCAAACGAAATTTTATACAATTTTTTCGTTTTTATTCGGATTAGGTTTTTATATTTTTATG
AGTCGTGCTGAAGCGAAAACAGATCATCCAAAAATTTTATTTGTTCGCCGCTTATTTATTTTATTATTATTCGGTTTCTT
ACATTACGTTCTTTTATGGGACGGAGACATTTTACATACTTATGCAATTGCTGGATTTTTCTTATTTTTATTTTATAAGA
GAGAACCTCGTACTATTTTAATATGGGCTATCGTTTTATTGAGTATTTTTCAATTCATTATGCTAATGGCTGGTATTACG
GTTGCATTGGTACCAAAGGAAGAGCTAGGTTTTTCCTTACCTATCATGCCATTAGAAGACTGGCTGTCACAAATACAAAA
TCGTTTCCATGCATTTTACGCTGATGGAATTGGATTAAATTTACTTATGCTTCCAGAAACAGTTGGGCTATTTTTACTTG
GTTTATACGCCGGCAAAAAGGATATTTTCCGCCGCACGAAAGAGTTAGATCCAAAACTTAAAAAATGGCAAATTATTATG
TTCCTTTTAACATTACCAATGTGGTTCTTCATGGTCCGTTACTTCTTATCAAAACCATTTTATGAACCAATTTATATGCA
GGTCTTTACAATGTTTAGCGGAAAAACGTTATTCATATTCTACATTTTCACTCTAATGCGTTTATTACAAAAAGAAAAAT
GGCAAACGTTATTACGTCCATTCCAATACGTTGGACGAATGGCATTAACAAATTACATCTCGCATACAATTGTTACATTA
CTTGTATTCGGGCTATTGTTTAAAAATGATTATCTGGCTCCACTATGGGTTGGACCACTATTCTGCATTAGTTTCTACAC
GTTACAAATCTTTATTAGCCGCTGGTGGCTTTCACATTACCAATACGGACCACTTGAGTACATTTGGCGTCTTGGTACTT
ACGGGAAAATGATGCCACTTAAAAAGAAAAGCAAGGTCTCGTAA

Upstream 100 bases:

>100_bases
CCTACATAACTTAACAGTTTAAAAAAATGGAAATATCCCCTATCCCCTCCACCTTACATTTTGTATAATAAAAGGGAATT
ACTTAACAAGGAGGAAAAAA

Downstream 100 bases:

>100_bases
CGAGACCTTGCTTTTTTACGCTTCTCTTACTGCACTTTGCATAGACACCGGCTCTTCTTTTACTTTCACTTTACGCTGCG
GCACCATATTAAATACGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTQNLTQGERIHSIDVIRGIAVLGIFLVNWPVIAGVDSRDLSGIYEGIDSYIRLFYDMFIQTKFYTIFSFLFGLGFYIFM
SRAEAKTDHPKILFVRRLFILLLFGFLHYVLLWDGDILHTYAIAGFFLFLFYKREPRTILIWAIVLLSIFQFIMLMAGIT
VALVPKEELGFSLPIMPLEDWLSQIQNRFHAFYADGIGLNLLMLPETVGLFLLGLYAGKKDIFRRTKELDPKLKKWQIIM
FLLTLPMWFFMVRYFLSKPFYEPIYMQVFTMFSGKTLFIFYIFTLMRLLQKEKWQTLLRPFQYVGRMALTNYISHTIVTL
LVFGLLFKNDYLAPLWVGPLFCISFYTLQIFISRWWLSHYQYGPLEYIWRLGTYGKMMPLKKKSKVS

Sequences:

>Translated_387_residues
MTQNLTQGERIHSIDVIRGIAVLGIFLVNWPVIAGVDSRDLSGIYEGIDSYIRLFYDMFIQTKFYTIFSFLFGLGFYIFM
SRAEAKTDHPKILFVRRLFILLLFGFLHYVLLWDGDILHTYAIAGFFLFLFYKREPRTILIWAIVLLSIFQFIMLMAGIT
VALVPKEELGFSLPIMPLEDWLSQIQNRFHAFYADGIGLNLLMLPETVGLFLLGLYAGKKDIFRRTKELDPKLKKWQIIM
FLLTLPMWFFMVRYFLSKPFYEPIYMQVFTMFSGKTLFIFYIFTLMRLLQKEKWQTLLRPFQYVGRMALTNYISHTIVTL
LVFGLLFKNDYLAPLWVGPLFCISFYTLQIFISRWWLSHYQYGPLEYIWRLGTYGKMMPLKKKSKVS
>Mature_386_residues
TQNLTQGERIHSIDVIRGIAVLGIFLVNWPVIAGVDSRDLSGIYEGIDSYIRLFYDMFIQTKFYTIFSFLFGLGFYIFMS
RAEAKTDHPKILFVRRLFILLLFGFLHYVLLWDGDILHTYAIAGFFLFLFYKREPRTILIWAIVLLSIFQFIMLMAGITV
ALVPKEELGFSLPIMPLEDWLSQIQNRFHAFYADGIGLNLLMLPETVGLFLLGLYAGKKDIFRRTKELDPKLKKWQIIMF
LLTLPMWFFMVRYFLSKPFYEPIYMQVFTMFSGKTLFIFYIFTLMRLLQKEKWQTLLRPFQYVGRMALTNYISHTIVTLL
VFGLLFKNDYLAPLWVGPLFCISFYTLQIFISRWWLSHYQYGPLEYIWRLGTYGKMMPLKKKSKVS

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788475, Length=422, Percent_Identity=26.0663507109005, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 45844; Mature: 45712

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50191 CRAL_TRIO

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNLTQGERIHSIDVIRGIAVLGIFLVNWPVIAGVDSRDLSGIYEGIDSYIRLFYDMFI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
QTKFYTIFSFLFGLGFYIFMSRAEAKTDHPKILFVRRLFILLLFGFLHYVLLWDGDILHT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
YAIAGFFLFLFYKREPRTILIWAIVLLSIFQFIMLMAGITVALVPKEELGFSLPIMPLED
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCCHHH
WLSQIQNRFHAFYADGIGLNLLMLPETVGLFLLGLYAGKKDIFRRTKELDPKLKKWQIIM
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH
FLLTLPMWFFMVRYFLSKPFYEPIYMQVFTMFSGKTLFIFYIFTLMRLLQKEKWQTLLRP
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FQYVGRMALTNYISHTIVTLLVFGLLFKNDYLAPLWVGPLFCISFYTLQIFISRWWLSHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
QYGPLEYIWRLGTYGKMMPLKKKSKVS
CCCHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQNLTQGERIHSIDVIRGIAVLGIFLVNWPVIAGVDSRDLSGIYEGIDSYIRLFYDMFI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
QTKFYTIFSFLFGLGFYIFMSRAEAKTDHPKILFVRRLFILLLFGFLHYVLLWDGDILHT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
YAIAGFFLFLFYKREPRTILIWAIVLLSIFQFIMLMAGITVALVPKEELGFSLPIMPLED
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCCHHH
WLSQIQNRFHAFYADGIGLNLLMLPETVGLFLLGLYAGKKDIFRRTKELDPKLKKWQIIM
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH
FLLTLPMWFFMVRYFLSKPFYEPIYMQVFTMFSGKTLFIFYIFTLMRLLQKEKWQTLLRP
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FQYVGRMALTNYISHTIVTLLVFGLLFKNDYLAPLWVGPLFCISFYTLQIFISRWWLSHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
QYGPLEYIWRLGTYGKMMPLKKKSKVS
CCCHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]