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The map label for this gene is oxdD [H]

Identifier: 218233622

GI number: 218233622

Start: 1036155

End: 1037351

Strand: Direct

Name: oxdD [H]

Synonym: BCB4264_A1062

Alternate gene names: 218233622

Gene position: 1036155-1037351 (Clockwise)

Preceding gene: 218234220

Following gene: 218233356

Centisome position: 19.12

GC content: 42.36

Gene sequence:

>1197_bases
ATGAAGAAACGTACTGTTAATGAAGCAGGAAGGAATGTGCCACAACCAATCCGCAGCGACGGAGCAGGTGCGATTGATTC
TGGACCTCGTAATGTTATGCGGGATATTCAAAATCCAAATATGCTTGTTCCGCCTATAACGGATGCAGGGTTAGTTCCTA
ACTTGAAGTTTTCATTCTCGGACACTTCTATGATTTTGAAACAAGGGGGGTGGTCTCGGGAGATTACTGTTCGAGAACTA
CCGGTTTCGACGACGATTGCAGGAGTAAATATGAGTTTAACGGCCGGTGGAGTACGAGAACTACATTGGCATAAAGAAGC
GGAATGGGCGTATATGCTTTTAGGACGGGCACGCATAACGGCTGTTGATCAAAATGGACGGAATTTTATTGCTGATGTTG
GACCAGGTGATCTTTGGTATTTTCCGCCTGGTATTCCGCATTCCATTCAAGGATTGGAACATTGTGAATTTCTACTCGTT
TTCGATGATGGACATTTTTCTGATTTATCTACTTTAGCTATTTCTGATTGGTTTGCGCATACGCCAAAAGAGGTGTTGTC
GGCTAATTTTGGAGTACCTGAGAGTGCTTTTCGTTCTATCCCTTCAGATCAAGTTTATATTTATCAAGGAGAGGTGCCAG
GTTCCCTTGAAAGTCAGGAAGTTCAATCACCGAAAGGAGAAGTTCCTTTAACATTTAAACATGAATTGTTAAAACAAAAG
CCGATTAAGACGCCTGGTGGTAGCGTTCGAATTGTAGATTCCACAAATTTCCCTATTTCCAAAACAATCGCAGCAGCGCT
CGTTGAGGTTGAGCCTGGTGGAATGAGAGAACTTCATTGGCACCCGAATAATGATGAATGGCAATATTATTTGACAGGGG
AAGCGAGAATGACTGTGTTTCTTGGAAATGGTACCGCTCGTACATTTGATTATAGAGCTGGCGATGTCGGATATGTACCG
TTTGCGACGGGGCATTATATTCAAAATACAGGTACCGAAACATTATGGTTTTTAGAGATGTTCAGAAGCAATCGTTTTGA
AGATGTATCGTTAAATCAATGGATGGCACTGACTCCTAAAGAAATAGTGGAGAGTAATATACATGTTGGCCCGCAAGTAA
TGGATTCTCTGCGTAAGGAGAAGTGGCCTGTTGTGAAATATCCGGGGTTTTCATATAGTCCGAAAAGTGATGAGTAA

Upstream 100 bases:

>100_bases
GATGATGTAACTCCATAGTAACTGTAACCATCTAAAGCCCAATTCATACACTATGATGGAGACTTTTTACTTCATAACCG
GATGAAAAAGGAGTGTAATC

Downstream 100 bases:

>100_bases
AAATGAAAATTTGCGTTATTCTTTCTGGAGACTGATAAGAAGGGATGGCGTATTTTTTATGCCTAATCTATTCTTTATCC
CGCTATTTGCCGGGTAGTAA

Product: oxalate decarboxylase OxdD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKKRTVNEAGRNVPQPIRSDGAGAIDSGPRNVMRDIQNPNMLVPPITDAGLVPNLKFSFSDTSMILKQGGWSREITVREL
PVSTTIAGVNMSLTAGGVRELHWHKEAEWAYMLLGRARITAVDQNGRNFIADVGPGDLWYFPPGIPHSIQGLEHCEFLLV
FDDGHFSDLSTLAISDWFAHTPKEVLSANFGVPESAFRSIPSDQVYIYQGEVPGSLESQEVQSPKGEVPLTFKHELLKQK
PIKTPGGSVRIVDSTNFPISKTIAAALVEVEPGGMRELHWHPNNDEWQYYLTGEARMTVFLGNGTARTFDYRAGDVGYVP
FATGHYIQNTGTETLWFLEMFRSNRFEDVSLNQWMALTPKEIVESNIHVGPQVMDSLRKEKWPVVKYPGFSYSPKSDE

Sequences:

>Translated_398_residues
MKKRTVNEAGRNVPQPIRSDGAGAIDSGPRNVMRDIQNPNMLVPPITDAGLVPNLKFSFSDTSMILKQGGWSREITVREL
PVSTTIAGVNMSLTAGGVRELHWHKEAEWAYMLLGRARITAVDQNGRNFIADVGPGDLWYFPPGIPHSIQGLEHCEFLLV
FDDGHFSDLSTLAISDWFAHTPKEVLSANFGVPESAFRSIPSDQVYIYQGEVPGSLESQEVQSPKGEVPLTFKHELLKQK
PIKTPGGSVRIVDSTNFPISKTIAAALVEVEPGGMRELHWHPNNDEWQYYLTGEARMTVFLGNGTARTFDYRAGDVGYVP
FATGHYIQNTGTETLWFLEMFRSNRFEDVSLNQWMALTPKEIVESNIHVGPQVMDSLRKEKWPVVKYPGFSYSPKSDE
>Mature_398_residues
MKKRTVNEAGRNVPQPIRSDGAGAIDSGPRNVMRDIQNPNMLVPPITDAGLVPNLKFSFSDTSMILKQGGWSREITVREL
PVSTTIAGVNMSLTAGGVRELHWHKEAEWAYMLLGRARITAVDQNGRNFIADVGPGDLWYFPPGIPHSIQGLEHCEFLLV
FDDGHFSDLSTLAISDWFAHTPKEVLSANFGVPESAFRSIPSDQVYIYQGEVPGSLESQEVQSPKGEVPLTFKHELLKQK
PIKTPGGSVRIVDSTNFPISKTIAAALVEVEPGGMRELHWHPNNDEWQYYLTGEARMTVFLGNGTARTFDYRAGDVGYVP
FATGHYIQNTGTETLWFLEMFRSNRFEDVSLNQWMALTPKEIVESNIHVGPQVMDSLRKEKWPVVKYPGFSYSPKSDE

Specific function: Converts oxalate to formate and CO(2) [H]

COG id: COG2140

COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis oxdC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017774
- InterPro:   IPR006045
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00190 Cupin_1 [H]

EC number: =4.1.1.2 [H]

Molecular weight: Translated: 44438; Mature: 44438

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRTVNEAGRNVPQPIRSDGAGAIDSGPRNVMRDIQNPNMLVPPITDAGLVPNLKFSFS
CCCCCCCHHCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCEEEECC
DTSMILKQGGWSREITVRELPVSTTIAGVNMSLTAGGVRELHWHKEAEWAYMLLGRARIT
CHHHHHHCCCCCCEEEEEECCCEEEEECCEEEEECCCCHHHHCCCCCCEEEEEECCEEEE
AVDQNGRNFIADVGPGDLWYFPPGIPHSIQGLEHCEFLLVFDDGHFSDLSTLAISDWFAH
EEECCCCEEEEECCCCCEEECCCCCCHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHC
TPKEVLSANFGVPESAFRSIPSDQVYIYQGEVPGSLESQEVQSPKGEVPLTFKHELLKQK
CCHHHHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCEEHHHHHHHCC
PIKTPGGSVRIVDSTNFPISKTIAAALVEVEPGGMRELHWHPNNDEWQYYLTGEARMTVF
CCCCCCCCEEEEECCCCCHHHHHEEEEEEECCCCCEEEEECCCCCCEEEEEECCEEEEEE
LGNGTARTFDYRAGDVGYVPFATGHYIQNTGTETLWFLEMFRSNRFEDVSLNQWMALTPK
ECCCCEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCHH
EIVESNIHVGPQVMDSLRKEKWPVVKYPGFSYSPKSDE
HHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MKKRTVNEAGRNVPQPIRSDGAGAIDSGPRNVMRDIQNPNMLVPPITDAGLVPNLKFSFS
CCCCCCCHHCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCEEEECC
DTSMILKQGGWSREITVRELPVSTTIAGVNMSLTAGGVRELHWHKEAEWAYMLLGRARIT
CHHHHHHCCCCCCEEEEEECCCEEEEECCEEEEECCCCHHHHCCCCCCEEEEEECCEEEE
AVDQNGRNFIADVGPGDLWYFPPGIPHSIQGLEHCEFLLVFDDGHFSDLSTLAISDWFAH
EEECCCCEEEEECCCCCEEECCCCCCHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHC
TPKEVLSANFGVPESAFRSIPSDQVYIYQGEVPGSLESQEVQSPKGEVPLTFKHELLKQK
CCHHHHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCEEHHHHHHHCC
PIKTPGGSVRIVDSTNFPISKTIAAALVEVEPGGMRELHWHPNNDEWQYYLTGEARMTVF
CCCCCCCCEEEEECCCCCHHHHHEEEEEEECCCCCEEEEECCCCCCEEEEEECCEEEEEE
LGNGTARTFDYRAGDVGYVPFATGHYIQNTGTETLWFLEMFRSNRFEDVSLNQWMALTPK
ECCCCEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCHH
EIVESNIHVGPQVMDSLRKEKWPVVKYPGFSYSPKSDE
HHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11546787 [H]