Click here to switch to the map view.

The map label for this gene is 218233611

Identifier: 218233611

GI number: 218233611

Start: 1509687

End: 1510373

Strand: Direct

Name: 218233611

Synonym: BCB4264_A1582

Alternate gene names: NA

Gene position: 1509687-1510373 (Clockwise)

Preceding gene: 218231178

Following gene: 218234158

Centisome position: 27.86

GC content: 29.55

Gene sequence:

>687_bases
ATGGAGAAAAATAAGAGTGGTACAAAAATATTGGATCGATTGATTACTTTAGTTGTTTCATATAGCATAGCATTTTCTAT
TTTTGCACTCGCAACAACGGCAGTTGTGTATGGAAAATGGTTGTATTATTTTGAAATTGATTTTTTAAATATTCCTGATT
TAGCGGATATGACGAAGGATGAAATTAAAAGAAATTACGATGTGCTTATTACATATTTATCCCCGTTTTATGACGGAGCA
TTACATTTGCCCACATTAGATATGTCCACAAATGGCCGTATTCATTTTGTAGATGTTAAAAATATTTTAGTAAAGATTCA
ATATGTGATGTATGCGACAATTATGATTGCAGTGATAGGCGGAATTTATTTATTAAAAAAGAAAAATGAAAAGTTTTTAC
TGCACGGATCGATTTTAACAATCATTTTTCCGATAGCGCTTATGTTACCAATTGCTATTAATTTTGAAAAGAGTTTTGTA
TTATTCCATAAACTTTTATTTAGTAATGATTATTGGGTTTTTGATCCTGAAAAGGATCCAATTATATTAATGTTACCAGA
AGAGTTCTTTATGCATGCTGCGTGTGCTATTTTATTATTCATCTTAGGTGGGAGTATACTTTGTTACAGCTTATATAGAT
ATTTCGTAAAAAAGAAAAGGATGTCACAGAAAAAATTCTCTGCTTAA

Upstream 100 bases:

>100_bases
TGGTTAAGTATTGCTGTACTATGTATTACATATTATTGTTGCTTACGTGAGCAAAGGAAACAATTTTCTTTATGATGGTT
AGAACATTTAGGGGGAGAAC

Downstream 100 bases:

>100_bases
AGAGAATTTTTTTCTTTGTAAAACGATAATATATTTTTCGGTCTAGTTCTGTTCTATTCTTGTCCAAATTAACATATTTT
GTACTAGTAGTTATAGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein TIGR; Rhodopsin-Like GPCR Superfamily Membrane Protein; Membrane Spanning Protein

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MEKNKSGTKILDRLITLVVSYSIAFSIFALATTAVVYGKWLYYFEIDFLNIPDLADMTKDEIKRNYDVLITYLSPFYDGA
LHLPTLDMSTNGRIHFVDVKNILVKIQYVMYATIMIAVIGGIYLLKKKNEKFLLHGSILTIIFPIALMLPIAINFEKSFV
LFHKLLFSNDYWVFDPEKDPIILMLPEEFFMHAACAILLFILGGSILCYSLYRYFVKKKRMSQKKFSA

Sequences:

>Translated_228_residues
MEKNKSGTKILDRLITLVVSYSIAFSIFALATTAVVYGKWLYYFEIDFLNIPDLADMTKDEIKRNYDVLITYLSPFYDGA
LHLPTLDMSTNGRIHFVDVKNILVKIQYVMYATIMIAVIGGIYLLKKKNEKFLLHGSILTIIFPIALMLPIAINFEKSFV
LFHKLLFSNDYWVFDPEKDPIILMLPEEFFMHAACAILLFILGGSILCYSLYRYFVKKKRMSQKKFSA
>Mature_228_residues
MEKNKSGTKILDRLITLVVSYSIAFSIFALATTAVVYGKWLYYFEIDFLNIPDLADMTKDEIKRNYDVLITYLSPFYDGA
LHLPTLDMSTNGRIHFVDVKNILVKIQYVMYATIMIAVIGGIYLLKKKNEKFLLHGSILTIIFPIALMLPIAINFEKSFV
LFHKLLFSNDYWVFDPEKDPIILMLPEEFFMHAACAILLFILGGSILCYSLYRYFVKKKRMSQKKFSA

Specific function: Unknown

COG id: COG4478

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26379; Mature: 26379

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNKSGTKILDRLITLVVSYSIAFSIFALATTAVVYGKWLYYFEIDFLNIPDLADMTKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCHHHCCHH
EIKRNYDVLITYLSPFYDGALHLPTLDMSTNGRIHFVDVKNILVKIQYVMYATIMIAVIG
HHHCCHHEEEEEHHHHCCCEEECCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
GIYLLKKKNEKFLLHGSILTIIFPIALMLPIAINFEKSFVLFHKLLFSNDYWVFDPEKDP
HHEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCC
IILMLPEEFFMHAACAILLFILGGSILCYSLYRYFVKKKRMSQKKFSA
EEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKNKSGTKILDRLITLVVSYSIAFSIFALATTAVVYGKWLYYFEIDFLNIPDLADMTKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCHHHCCHH
EIKRNYDVLITYLSPFYDGALHLPTLDMSTNGRIHFVDVKNILVKIQYVMYATIMIAVIG
HHHCCHHEEEEEHHHHCCCEEECCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
GIYLLKKKNEKFLLHGSILTIIFPIALMLPIAINFEKSFVLFHKLLFSNDYWVFDPEKDP
HHEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCC
IILMLPEEFFMHAACAILLFILGGSILCYSLYRYFVKKKRMSQKKFSA
EEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA