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The map label for this gene is ylbF [H]

Identifier: 218233450

GI number: 218233450

Start: 3956493

End: 3956945

Strand: Reverse

Name: ylbF [H]

Synonym: BCB4264_A4035

Alternate gene names: 218233450

Gene position: 3956945-3956493 (Counterclockwise)

Preceding gene: 218235186

Following gene: 218234022

Centisome position: 73.02

GC content: 40.18

Gene sequence:

>453_bases
ATGATTGTAGCGACGCTAGAAAGCGTATTAATATTAGATAAGGCAGAGCAGCTTGCAAAAGCGATTATCTGTTCAGATAT
AGCAGAAGATTATCGTAAGTATTATAGAGAATTACATGAAGATATGGAACTTCAGACGCTCATTCAGCAATTTACAGCGA
TGAAAGAACGGTATGAGGAAGTACAGCGTTTTGGAAAATACCATCCTGACTATACTACCGTGTCAATGAAAATGAGAGAA
TTAAAGCGTTCTGTGGACTTACATGATAAGGTTGCAGCTTTTAAAAGAGCAGAAACTGCTTTGCAGAAGTTATTAGACGA
AGTTAGTGTAGCAATCGGTTCGGAAGTGTCTTCTTCCATTAAAGTGCCAACAGGAAATCCATTCTTTGATGCTGGTGGCT
GTGGTGGAGGTTGTGGTACTGGCGGAGGTTGTGGTTGTAAAAAAACGGGGTGA

Upstream 100 bases:

>100_bases
AGTGTAAAAATAGTTTCATTATATCTTTCTTTTGAGTAAGTCACTTCAATTAGTAGTTCTAATCTAAATGTGGTATGATG
GATACTCGGAGGTGTCTCTC

Downstream 100 bases:

>100_bases
TGTGCCCCGTTTTTTAGAAGTTGGAAGAAAACGTATACAGAGTTTGTCCTGTAATGTTATAAATTTCTGATTGGTTTTCA
TAGAATATAAAATATATGTT

Product: ComK regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIVATLESVLILDKAEQLAKAIICSDIAEDYRKYYRELHEDMELQTLIQQFTAMKERYEEVQRFGKYHPDYTTVSMKMRE
LKRSVDLHDKVAAFKRAETALQKLLDEVSVAIGSEVSSSIKVPTGNPFFDAGGCGGGCGTGGGCGCKKTG

Sequences:

>Translated_150_residues
MIVATLESVLILDKAEQLAKAIICSDIAEDYRKYYRELHEDMELQTLIQQFTAMKERYEEVQRFGKYHPDYTTVSMKMRE
LKRSVDLHDKVAAFKRAETALQKLLDEVSVAIGSEVSSSIKVPTGNPFFDAGGCGGGCGTGGGCGCKKTG
>Mature_150_residues
MIVATLESVLILDKAEQLAKAIICSDIAEDYRKYYRELHEDMELQTLIQQFTAMKERYEEVQRFGKYHPDYTTVSMKMRE
LKRSVDLHDKVAAFKRAETALQKLLDEVSVAIGSEVSSSIKVPTGNPFFDAGGCGGGCGTGGGCGCKKTG

Specific function: Regulates sporulation prior to stage II. Positively controls the competence regulator ComK at a post-transcriptional level. May modulate the translation, stability or activity of ComS. May work together with YmcA to regulate community development [H]

COG id: COG3679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010368 [H]

Pfam domain/function: PF06133 DUF964 [H]

EC number: NA

Molecular weight: Translated: 16564; Mature: 16564

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVATLESVLILDKAEQLAKAIICSDIAEDYRKYYRELHEDMELQTLIQQFTAMKERYEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
VQRFGKYHPDYTTVSMKMRELKRSVDLHDKVAAFKRAETALQKLLDEVSVAIGSEVSSSI
HHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KVPTGNPFFDAGGCGGGCGTGGGCGCKKTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIVATLESVLILDKAEQLAKAIICSDIAEDYRKYYRELHEDMELQTLIQQFTAMKERYEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
VQRFGKYHPDYTTVSMKMRELKRSVDLHDKVAAFKRAETALQKLLDEVSVAIGSEVSSSI
HHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KVPTGNPFFDAGGCGGGCGTGGGCGCKKTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10712692 [H]