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The map label for this gene is dal1 [H]

Identifier: 218233448

GI number: 218233448

Start: 238213

End: 239382

Strand: Direct

Name: dal1 [H]

Synonym: BCB4264_A0267

Alternate gene names: 218233448

Gene position: 238213-239382 (Clockwise)

Preceding gene: 218232711

Following gene: 218234154

Centisome position: 4.4

GC content: 39.15

Gene sequence:

>1170_bases
ATGGAAGAAGCACCATTTTACCGTGACACTTGGGTGGAAGTGGATTTAGATGCCATTTATAACAACGTTACACATATTAA
AGAGTTCATCCCAAGTAATGTAGAGATTTTTGCTGTAGTTAAAGCAAACGCATATGGGCACGATTATGTACCGGTGGCTA
AAACGGCATTAGAAGCAGGTGCAACAAGGTTAGCTGTTGCTTTTTTAGATGAGGCTTTAGTGCTTCGGAGGGCTGGTATT
ACTGAGCCGATTTTAGTGTTAGGTCCCTCGCCGCCGCGTGATGTAAATGTAGCTGCTGAAAATGATGTAGCGCTAACTGT
TTTTCAAAAAGAATGGGTGGACGAAGCAATTAAACTTTGGGATGGTTCATCTGTAATGAAATTCCATATTAACTTTGATA
GTGGTATGGGGAGAATTGGAATACGTGAAAGAAAAGAGCTAAAAGAATTTTTAAAGAGTTTAGAGGGTGCACCGTTTTTA
GAGTTAGAAGGAGTATACACGCATTTTGCAACGGCAGATGAGGTTGAGACTTCGTATTTTGATAAGCAATATAACACGTT
CTTAGAGCAGTTAAGTTGGTTGAAAGAATTCGGAGTGGATCCTAAGTTTGTTCATACAGCTAATAGTGCTGCGACGTTAC
GTTTTCAAGGGATTACATTTAATGCAGTGCGAATTGGGATTGCAATGTATGGATTATCTCCTTCTGTAGAAATACGTCCT
TTTTTACCATTTGAATTAGAACCGGCGCTATCACTTCATACGAAAGTCGCTCATATTAAACAGGTAATTAAAGGTGATGG
AATTAGTTATAATGTCACCTACCGAACGAAAACTGAAGAATGGATTGCGACTGTAGCGATTGGCTATGCAGATGGGTGGC
TTAGAAGGTTACAAGGATTTGAAGTGCTTATAAATGGTAAAAGGGTACCGATTGTAGGGCGAGTAACAATGGATCAGTTC
ATGATTCATCTTCCTTGTGAAGTGCCACTTGGTACGAAAGTTACGCTTATTGGAAGGCAAGGAGATGAGTATATTAGCGC
TACAGAGGTTGCGGAATACTCAGGGACTATTAATTATGAAATTATTGCAACGATCAGTTTCCGTGTGCCAAGAATATTTA
TACGGAATGGTAAGGTTGTAGAGATAATTAATTACTTGAACAATATATAG

Upstream 100 bases:

>100_bases
ATATATGTGCACCACGTCTTTTCTTAGTTTGAAGGTGGATTTCATAAAAGAAGCATATAAAAGAATAAGCTTCGCATATC
GTGTATAAGGAAGTGTATTT

Downstream 100 bases:

>100_bases
AAGGTAGTATGATTGCTTCTTGTCATTGGGGTGACTGTTCATTGCTGGATAATAAGCTCTTTTTGATGAGAAGCTTTTTA
CTTATAATCATTTTTTATAT

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAGATRLAVAFLDEALVLRRAGI
TEPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLWDGSSVMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFL
ELEGVYTHFATADEVETSYFDKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP
FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGFEVLINGKRVPIVGRVTMDQF
MIHLPCEVPLGTKVTLIGRQGDEYISATEVAEYSGTINYEIIATISFRVPRIFIRNGKVVEIINYLNNI

Sequences:

>Translated_389_residues
MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAGATRLAVAFLDEALVLRRAGI
TEPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLWDGSSVMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFL
ELEGVYTHFATADEVETSYFDKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP
FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGFEVLINGKRVPIVGRVTMDQF
MIHLPCEVPLGTKVTLIGRQGDEYISATEVAEYSGTINYEIIATISFRVPRIFIRNGKVVEIINYLNNI
>Mature_389_residues
MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAGATRLAVAFLDEALVLRRAGI
TEPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLWDGSSVMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFL
ELEGVYTHFATADEVETSYFDKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP
FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGFEVLINGKRVPIVGRVTMDQF
MIHLPCEVPLGTKVTLIGRQGDEYISATEVAEYSGTINYEIIATISFRVPRIFIRNGKVVEIINYLNNI

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1790487, Length=378, Percent_Identity=30.1587301587302, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1787439, Length=373, Percent_Identity=29.2225201072386, Blast_Score=134, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 43760; Mature: 43760

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00395 ALANINE_RACEMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAG
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHC
ATRLAVAFLDEALVLRRAGITEPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLW
CHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHC
DGSSVMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFLELEGVYTHFATADEVETSYF
CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCHHHHHHH
DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECEEEEHEEEEEEEECCCCCCEEEE
FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHEEEEEEEECHHHHHHHHCCC
EVLINGKRVPIVGRVTMDQFMIHLPCEVPLGTKVTLIGRQGDEYISATEVAEYSGTINYE
EEEECCCEEEEEEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEE
IIATISFRVPRIFIRNGKVVEIINYLNNI
EEEEEEEECCEEEEECCCEEHHHHHHHCC
>Mature Secondary Structure
MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAG
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHC
ATRLAVAFLDEALVLRRAGITEPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLW
CHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHC
DGSSVMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFLELEGVYTHFATADEVETSYF
CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCHHHHHHH
DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECEEEEHEEEEEEEECCCCCCEEEE
FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHEEEEEEEECHHHHHHHHCCC
EVLINGKRVPIVGRVTMDQFMIHLPCEVPLGTKVTLIGRQGDEYISATEVAEYSGTINYE
EEEECCCEEEEEEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEE
IIATISFRVPRIFIRNGKVVEIINYLNNI
EEEEEEEECCEEEEECCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA