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The map label for this gene is glpQ [H]

Identifier: 218233413

GI number: 218233413

Start: 3383576

End: 3384520

Strand: Reverse

Name: glpQ [H]

Synonym: BCB4264_A3503

Alternate gene names: 218233413

Gene position: 3384520-3383576 (Counterclockwise)

Preceding gene: 218232643

Following gene: 218234152

Centisome position: 62.46

GC content: 33.86

Gene sequence:

>945_bases
ATGAGAAAGATTATTAGCGTTTTAGTTATTTTCTTTATGACGGGGAGCATTTTTGCTGGGGGAGCTGTTCATGCGAAAGC
AGAAGGAAAGCATGAATGGAATACGAATAAGTTTTTAAATATTGCACATCGCGGAGCAAGTGGACATGCACCTGAGCACA
CTTTTGCTTCTTATGATTTAGTGAAAAAAATGAAAGCGGATTATTTAGAGTTAGATATTCAATTAACAAAGGATGGCCAA
TTAATTGCAATGCATGATACAGCGGTTGATCGCACTACAAATGGAACAGGCGAAGTACGTGATAAAACGTTAAGCGAAAT
AAAGAGTTTAGATGCAGGATCATGGTTTAATAAAGCGTATCCAGAAAAGGCTAAGCATGAGTATGTTGGGCAAAAAGTTC
CAACTCTTGAAGAAATTTTTCAAAAGTATGGAAGAAGTATGAAGTATTATATTGAAACAAAATCACCAGATGTGTATCCA
GGAATGGAAGAGAAATTGTTGGCGTTGTTACAAAAATATAATTTAGTAGGTCAAAACATGTCTTCTAGCCGTGTTATGAT
TCAATCATTTAGTAAAGATAGTTTGAAAAAGATTCATAGTATGAATGAAAATATTCCATTAGTTCAATTGCTTTGGTATT
ATCCAAATGAAAACAATGAAATTGTTGAATGGTCTGGCATTACACAGGAACCGAAAAGTGTAACAAATGATGATTTTCAA
GAAATTAAAAAGTATGCAGCTGGTATTGGACCAAACTTACGTAATGATAACGGGGAACTAATTATTGATGAGTCCTATAT
GAAAATGGCTAGGAAAAATGGACTGTTAATTCACCCTTATACAATTAATGAGAAACCAGATATGAGACTGTTAATCAAAT
GGGGTGCTACAGGAATGTTTACAAATTATCCGGATCGATTACATAGTGTATTGAAGGAAAAATAA

Upstream 100 bases:

>100_bases
AATTTTAATATAGGTTTATAAAAATATTGAAAGTGTGTCTTCTATTTCGTGTAAATCTCATTAGCTTGTTGAAATTTGCA
ACGTAGGAAGGGTTAGAAGG

Downstream 100 bases:

>100_bases
GTGGAACAGGGTATACCAGTGTTTTAGGTATACCCTTTTTAATCTAACTCTCCGATAAACAGAATCTCTTTTTCATAGCA
TTCATCTGCATCATAAATAA

Product: putative glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRKIISVLVIFFMTGSIFAGGAVHAKAEGKHEWNTNKFLNIAHRGASGHAPEHTFASYDLVKKMKADYLELDIQLTKDGQ
LIAMHDTAVDRTTNGTGEVRDKTLSEIKSLDAGSWFNKAYPEKAKHEYVGQKVPTLEEIFQKYGRSMKYYIETKSPDVYP
GMEEKLLALLQKYNLVGQNMSSSRVMIQSFSKDSLKKIHSMNENIPLVQLLWYYPNENNEIVEWSGITQEPKSVTNDDFQ
EIKKYAAGIGPNLRNDNGELIIDESYMKMARKNGLLIHPYTINEKPDMRLLIKWGATGMFTNYPDRLHSVLKEK

Sequences:

>Translated_314_residues
MRKIISVLVIFFMTGSIFAGGAVHAKAEGKHEWNTNKFLNIAHRGASGHAPEHTFASYDLVKKMKADYLELDIQLTKDGQ
LIAMHDTAVDRTTNGTGEVRDKTLSEIKSLDAGSWFNKAYPEKAKHEYVGQKVPTLEEIFQKYGRSMKYYIETKSPDVYP
GMEEKLLALLQKYNLVGQNMSSSRVMIQSFSKDSLKKIHSMNENIPLVQLLWYYPNENNEIVEWSGITQEPKSVTNDDFQ
EIKKYAAGIGPNLRNDNGELIIDESYMKMARKNGLLIHPYTINEKPDMRLLIKWGATGMFTNYPDRLHSVLKEK
>Mature_314_residues
MRKIISVLVIFFMTGSIFAGGAVHAKAEGKHEWNTNKFLNIAHRGASGHAPEHTFASYDLVKKMKADYLELDIQLTKDGQ
LIAMHDTAVDRTTNGTGEVRDKTLSEIKSLDAGSWFNKAYPEKAKHEYVGQKVPTLEEIFQKYGRSMKYYIETKSPDVYP
GMEEKLLALLQKYNLVGQNMSSSRVMIQSFSKDSLKKIHSMNENIPLVQLLWYYPNENNEIVEWSGITQEPKSVTNDDFQ
EIKKYAAGIGPNLRNDNGELIIDESYMKMARKNGLLIHPYTINEKPDMRLLIKWGATGMFTNYPDRLHSVLKEK

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=98, Percent_Identity=42.8571428571429, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI1788572, Length=373, Percent_Identity=27.6139410187668, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1789858, Length=266, Percent_Identity=24.812030075188, Blast_Score=86, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17542344, Length=276, Percent_Identity=25.7246376811594, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 35847; Mature: 35847

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIISVLVIFFMTGSIFAGGAVHAKAEGKHEWNTNKFLNIAHRGASGHAPEHTFASYDL
CHHHHHHHHHHHHHCCHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
VKKMKADYLELDIQLTKDGQLIAMHDTAVDRTTNGTGEVRDKTLSEIKSLDAGSWFNKAY
HHHHHCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCC
PEKAKHEYVGQKVPTLEEIFQKYGRSMKYYIETKSPDVYPGMEEKLLALLQKYNLVGQNM
CHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
SSSRVMIQSFSKDSLKKIHSMNENIPLVQLLWYYPNENNEIVEWSGITQEPKSVTNDDFQ
CCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHH
EIKKYAAGIGPNLRNDNGELIIDESYMKMARKNGLLIHPYTINEKPDMRLLIKWGATGMF
HHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCCCCC
TNYPDRLHSVLKEK
CCCHHHHHHHHHCC
>Mature Secondary Structure
MRKIISVLVIFFMTGSIFAGGAVHAKAEGKHEWNTNKFLNIAHRGASGHAPEHTFASYDL
CHHHHHHHHHHHHHCCHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
VKKMKADYLELDIQLTKDGQLIAMHDTAVDRTTNGTGEVRDKTLSEIKSLDAGSWFNKAY
HHHHHCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCC
PEKAKHEYVGQKVPTLEEIFQKYGRSMKYYIETKSPDVYPGMEEKLLALLQKYNLVGQNM
CHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
SSSRVMIQSFSKDSLKKIHSMNENIPLVQLLWYYPNENNEIVEWSGITQEPKSVTNDDFQ
CCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHH
EIKKYAAGIGPNLRNDNGELIIDESYMKMARKNGLLIHPYTINEKPDMRLLIKWGATGMF
HHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCCCCC
TNYPDRLHSVLKEK
CCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377 [H]