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The map label for this gene is ykpA [H]

Identifier: 218233396

GI number: 218233396

Start: 2820633

End: 2822258

Strand: Reverse

Name: ykpA [H]

Synonym: BCB4264_A2952

Alternate gene names: 218233396

Gene position: 2822258-2820633 (Counterclockwise)

Preceding gene: 218231239

Following gene: 218235012

Centisome position: 52.08

GC content: 36.84

Gene sequence:

>1626_bases
ATGATTACAGTAAGTAACGTTAGTTTGCGTTTCGCGGATCGCAAATTATTTGAAGATGTTAACATAAAATTCACGCCAGG
TAACTGCTACGGTTTAATCGGAGCAAACGGTGCTGGTAAATCTACATTCCTAAAGATTTTATCTGGAGAAATTGAACCAT
CAACAGGTGACATACATATTACGCCAGGTGAGCGTCTAGCAGTATTAAAACAGAACCACTTCGAATATGAAGAGTTCCCA
GTATTAGAAACAGTAATTATGGGTCACACGCAACTTTACAAAGTAATGCAAGAGAAAAATGCTATTTACATGAAAGAAGA
CTTTAGTGATGAAGATGGAATGCGCGCTGCTGAACTTGAAGGTGAGTTCGCTGAGCTTAACGGTTGGGAAGCTGAGTCAG
AAGCTGCAATTCTTCTTAAAGGTTTAGGTATTGGTGAAGACCTTCATGATAAGAAATTGTCAGAATTAACTGGGGCAGAG
AAAGTAAAAGTATTACTTGCTCAAGCTTTATTCGGTCAACCTGACATTCTATTATTAGATGAGCCTACCAACCACTTGGA
CTTAAAAGCGATTCAATGGTTAGAAAACTTCTTAATGAACTTTGAAAACACAGTTATCGTAGTATCCCATGACCGTCACT
TCTTAAATAAAGTATGTACGCACATGGCTGACCTTGATTTCGGTAAAATTCAACTTTATGTTGGTAACTATGACTTCTGG
TATGAGTCAAGCCAATTAGCTTTAAAATTAACACAAGATGCTAATAAGAAAAAAGAAGAGAAAGTAAAAGAGTTACAAAA
CTTCATTGCACGCTTTAGTTCAAACGCTTCTAAAGCGAAACAAGCAACTTCTCGTAAAAAATTATTAGACAAAATTACAT
TAGATGATATTAGACCGTCATCACGTCGTTACCCATTCGTTGGCTTCACACCTGAGCGTGAAGTAGGAAATGACTTATTA
ACTGTTGAAGGTCTGTCTAAAACAATTGATGGTGAAAAAGTGTTAGATAATGTGTACTTCACTTTAAATAAAGGTGATAA
AGTTGCATTTATCGGCCGTAACGATATTGCGATGACAACATTATTTAAAATTCTTATGGGTGAAATGGAGCCGGATAGCG
GTTCATTCAAATGGGGTGTTACAACCTCTCAATCTTACTTCCCAAGAGATAACTCTAAGTACTTTGAGAACAGTGATTAC
AACTTAGTTGAATGGTTACGTCAATTCTCTCCACAAGATGAGTCTGAAAGCTTCTTACGTGGTTTCTTAGGCCGTATGTT
ATTCTCAGGTGAAGAAGTTAAGAAGAACGTTTCTGTATTATCTGGAGGCGAAAAAGTTCGTTGTATGTTATCTAAAATGA
TGTTAAGTGGTGCGAACGTAATCACACTTGACGATCCAACGAACCACTTAGACCTTGAGTCAATCACAGCATTAAACAAC
GGTTTAATTGCATTCAAAGGTACAATCTTATTCACATCTCATGACCATCAGTTCGTGCAAACAATTGCAAACCGCATTAT
CGAAGTAACACCAAACGGTGTAATCGATAAAGAGGCTACTTATGATGAGTTCTTAGAAAATGAGGAACTTCAAAAACAAG
TAGATGCAATGTACAAAGGTCAATAA

Upstream 100 bases:

>100_bases
ATAATAGCTATAGTCTACAATAATTGAGTCGTAATATGCGATTTTTTAAGACAATCGGTGAGAAAACGCTGAAATAAGCG
GTATTAGTAGGAGGACACAA

Downstream 100 bases:

>100_bases
TATATAATGAAAAAACTCGCTCTTTTTAGAGCGAGTTTTTTGTCGAGAAAACGTAACATCGCTGGTCGGTCAAATGAATA
ATTATTCAAATATAATATTA

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAE
KVKVLLAQALFGQPDILLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDY
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
GLIAFKGTILFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKGQ

Sequences:

>Translated_541_residues
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAE
KVKVLLAQALFGQPDILLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDY
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
GLIAFKGTILFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKGQ
>Mature_541_residues
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAE
KVKVLLAQALFGQPDILLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDY
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
GLIAFKGTILFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKGQ

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=538, Percent_Identity=30.1115241635688, Blast_Score=251, Evalue=9e-67,
Organism=Homo sapiens, GI27881506, Length=517, Percent_Identity=31.1411992263056, Blast_Score=229, Evalue=6e-60,
Organism=Homo sapiens, GI10947137, Length=517, Percent_Identity=31.1411992263056, Blast_Score=229, Evalue=6e-60,
Organism=Homo sapiens, GI10947135, Length=528, Percent_Identity=27.8409090909091, Blast_Score=176, Evalue=7e-44,
Organism=Homo sapiens, GI69354671, Length=528, Percent_Identity=27.8409090909091, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=26.4462809917355, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=26.4462809917355, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI105990541, Length=204, Percent_Identity=29.9019607843137, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI21536376, Length=225, Percent_Identity=24.4444444444444, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI255708477, Length=210, Percent_Identity=28.0952380952381, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=45.9510357815443, Blast_Score=525, Evalue=1e-150,
Organism=Escherichia coli, GI1789751, Length=510, Percent_Identity=33.921568627451, Blast_Score=284, Evalue=1e-77,
Organism=Escherichia coli, GI2367384, Length=533, Percent_Identity=30.3939962476548, Blast_Score=241, Evalue=8e-65,
Organism=Escherichia coli, GI1787182, Length=514, Percent_Identity=29.9610894941634, Blast_Score=213, Evalue=3e-56,
Organism=Escherichia coli, GI1790525, Length=534, Percent_Identity=22.8464419475655, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1786398, Length=261, Percent_Identity=25.2873563218391, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=29.1139240506329, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789864, Length=221, Percent_Identity=25.3393665158371, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1789891, Length=222, Percent_Identity=25.6756756756757, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1786703, Length=229, Percent_Identity=29.6943231441048, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788165, Length=215, Percent_Identity=22.3255813953488, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788225, Length=251, Percent_Identity=23.9043824701195, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=26.7605633802817, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=21.52466367713, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787370, Length=226, Percent_Identity=24.3362831858407, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=545, Percent_Identity=28.9908256880734, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17555318, Length=541, Percent_Identity=27.1719038817006, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17559834, Length=544, Percent_Identity=26.2867647058824, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17565586, Length=220, Percent_Identity=26.3636363636364, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17558664, Length=218, Percent_Identity=29.3577981651376, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=229, Percent_Identity=27.5109170305677, Blast_Score=69, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=530, Percent_Identity=33.3962264150943, Blast_Score=251, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6321121, Length=532, Percent_Identity=26.8796992481203, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6325030, Length=430, Percent_Identity=24.4186046511628, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=370, Percent_Identity=24.3243243243243, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6323278, Length=367, Percent_Identity=23.433242506812, Blast_Score=94, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24666836, Length=546, Percent_Identity=29.6703296703297, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24642252, Length=523, Percent_Identity=27.7246653919694, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI18859989, Length=523, Percent_Identity=27.7246653919694, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI24641342, Length=517, Percent_Identity=27.852998065764, Blast_Score=202, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61132; Mature: 61132

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHI
CEEEECEEEEEHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGERLAVLKQNHFEYEEFPVLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELE
CCCCEEEEEECCCCCCHHCCHHHHHHHCHHHHHHHHHHCCCEEEECCCCCCCCCEEHHCC
GEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAEKVKVLLAQALFGQPDILLLD
CCHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
EPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPS
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SRRYPFVGFTPEREVGNDLLTVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTT
CCCCCEECCCCCHHHCCCEEEECCCHHCCCHHHHHCCEEEEEECCCEEEEECCCCHHHHH
LFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDYNLVEWLRQFSPQDESESFLR
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHH
GFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCC
GLIAFKGTILFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKG
CEEEEEEEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC
Q
C
>Mature Secondary Structure
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHI
CEEEECEEEEEHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGERLAVLKQNHFEYEEFPVLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELE
CCCCEEEEEECCCCCCHHCCHHHHHHHCHHHHHHHHHHCCCEEEECCCCCCCCCEEHHCC
GEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAEKVKVLLAQALFGQPDILLLD
CCHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
EPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPS
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SRRYPFVGFTPEREVGNDLLTVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTT
CCCCCEECCCCCHHHCCCEEEECCCHHCCCHHHHHCCEEEEEECCCEEEEECCCCHHHHH
LFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDYNLVEWLRQFSPQDESESFLR
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHH
GFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCC
GLIAFKGTILFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKG
CEEEEEEEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]