Click here to switch to the map view.

The map label for this gene is yhhX [H]

Identifier: 218233376

GI number: 218233376

Start: 3292213

End: 3293274

Strand: Reverse

Name: yhhX [H]

Synonym: BCB4264_A3413

Alternate gene names: 218233376

Gene position: 3293274-3292213 (Counterclockwise)

Preceding gene: 218234414

Following gene: 218231227

Centisome position: 60.77

GC content: 36.63

Gene sequence:

>1062_bases
ATGACATTAACAATGGGCTTTATTGGATTTGGAAAGTCAGCTAACCGCTATCACTTACCTTATGTAAACACGCGTAATAA
TATAAAAATAAAAAGGATTTTTGTACGTCAAATAAATGAAAAATTAGCGGCTCCATATAAGGAAAAAGGTGTTTACTTCA
CTACTGATTTGGACGAATTGTTGAATGACAAGGAAATTCAAGTGGTGACGATCTGTACGCCAGCACATACGCATTATGAA
TTAGCAAAAAAAGTTATACTTGCTGGAAAATCAGTTATCGTTGAAAAACCATTTTGCGATACAGTGGAACATGCGAAAGA
ATTATTAGCTTTAGGACGAGAAAAAGGTGTAGTAGTTATGCCTTATCAAAACCGCCGTTTTGATGGTGATTTTTTAGCTG
TGAAGCAAGTAATTGAACAAGGATTCCTTGGTGATATTATTGAGATTGAATCACATATTGATTATTTCCGTCCTGGTTCA
ATCACTCATGAAGCTCCAAAAGAAGAAGGTTCATTTTACAGTTTAGGTATTCATACGATGGACCGTATGATTTCACTATT
CGGCCGTCCAGATACGGTGACATACGATATTCGTAATAATGAAATGGAAGGTGCGGTTGATAACTATTTCGATGTTGGTT
TACATTACGGAAATCAGTTGAAGATTAAGCTGAAAACGAACCATGTCGTAGCAAAAGATTATCCACGCTTTATCGTTCAT
GGAACAAACGGATCATTTATTAAATATGGTGAAGATCAGCAGGAAAATGATTTGAAAGCGGGGATTATGCCTGAGAGTGC
AGGGTTTGGTGAAGATTCACCGATGTACTATGGAGTTGCTAAGTATCGTAATGCAAATGGTGACTGGATTGAAAAACAAA
TTAAAACGCCACTTGGTGATTACGGTCGTTTCTATGATGCCGCGTATGAAACAATTATAAATGGTGCACCAAAACTTGTG
AAAGACGAAGAAGCGGTAACGAATATTGAAATCTTAGAAAATGGATTTGCTGCCCCATCACCTTCAGTTTACAAACTTGA
GGCTTTACATTTGAATGAATAG

Upstream 100 bases:

>100_bases
ATTTAATATATAATTATAAAGTTAAAACTATATACTTTTAATAATTAAATTATATAATAAATATAGAAACGAAAATTTAT
GAGCAAGGAAGTTGAAAAAT

Downstream 100 bases:

>100_bases
AAGAGAGTTTGCAGTATAAAGGAGGTATGAAAATGGCAAGCGGATCAACACAAGTAAAATACCTCGGCATTTATCAAAAG
ATTAAACAGCAAATTTTAGG

Product: oxidoreductase, Gfo/Idh/MocA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTLTMGFIGFGKSANRYHLPYVNTRNNIKIKRIFVRQINEKLAAPYKEKGVYFTTDLDELLNDKEIQVVTICTPAHTHYE
LAKKVILAGKSVIVEKPFCDTVEHAKELLALGREKGVVVMPYQNRRFDGDFLAVKQVIEQGFLGDIIEIESHIDYFRPGS
ITHEAPKEEGSFYSLGIHTMDRMISLFGRPDTVTYDIRNNEMEGAVDNYFDVGLHYGNQLKIKLKTNHVVAKDYPRFIVH
GTNGSFIKYGEDQQENDLKAGIMPESAGFGEDSPMYYGVAKYRNANGDWIEKQIKTPLGDYGRFYDAAYETIINGAPKLV
KDEEAVTNIEILENGFAAPSPSVYKLEALHLNE

Sequences:

>Translated_353_residues
MTLTMGFIGFGKSANRYHLPYVNTRNNIKIKRIFVRQINEKLAAPYKEKGVYFTTDLDELLNDKEIQVVTICTPAHTHYE
LAKKVILAGKSVIVEKPFCDTVEHAKELLALGREKGVVVMPYQNRRFDGDFLAVKQVIEQGFLGDIIEIESHIDYFRPGS
ITHEAPKEEGSFYSLGIHTMDRMISLFGRPDTVTYDIRNNEMEGAVDNYFDVGLHYGNQLKIKLKTNHVVAKDYPRFIVH
GTNGSFIKYGEDQQENDLKAGIMPESAGFGEDSPMYYGVAKYRNANGDWIEKQIKTPLGDYGRFYDAAYETIINGAPKLV
KDEEAVTNIEILENGFAAPSPSVYKLEALHLNE
>Mature_352_residues
TLTMGFIGFGKSANRYHLPYVNTRNNIKIKRIFVRQINEKLAAPYKEKGVYFTTDLDELLNDKEIQVVTICTPAHTHYEL
AKKVILAGKSVIVEKPFCDTVEHAKELLALGREKGVVVMPYQNRRFDGDFLAVKQVIEQGFLGDIIEIESHIDYFRPGSI
THEAPKEEGSFYSLGIHTMDRMISLFGRPDTVTYDIRNNEMEGAVDNYFDVGLHYGNQLKIKLKTNHVVAKDYPRFIVHG
TNGSFIKYGEDQQENDLKAGIMPESAGFGEDSPMYYGVAKYRNANGDWIEKQIKTPLGDYGRFYDAAYETIINGAPKLVK
DEEAVTNIEILENGFAAPSPSVYKLEALHLNE

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family. Biliverdin reductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789848, Length=347, Percent_Identity=51.5850144092219, Blast_Score=358, Evalue=1e-100,
Organism=Escherichia coli, GI87081947, Length=339, Percent_Identity=31.5634218289086, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1787574, Length=192, Percent_Identity=26.0416666666667, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39966; Mature: 39835

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTMGFIGFGKSANRYHLPYVNTRNNIKIKRIFVRQINEKLAAPYKEKGVYFTTDLDEL
CEEEEEEEECCCCCCEEECCEECCCCCEEEEHHHHHHHHHHHCCCHHHCCEEEEECHHHH
LNDKEIQVVTICTPAHTHYELAKKVILAGKSVIVEKPFCDTVEHAKELLALGREKGVVVM
CCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEE
PYQNRRFDGDFLAVKQVIEQGFLGDIIEIESHIDYFRPGSITHEAPKEEGSFYSLGIHTM
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHH
DRMISLFGRPDTVTYDIRNNEMEGAVDNYFDVGLHYGNQLKIKLKTNHVVAKDYPRFIVH
HHHHHHHCCCCEEEEEECCCCCCCCHHHHEEHHEECCCEEEEEEECCEEEECCCCEEEEE
GTNGSFIKYGEDQQENDLKAGIMPESAGFGEDSPMYYGVAKYRNANGDWIEKQIKTPLGD
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHEEECCCCHHHHHHHCCCCCH
YGRFYDAAYETIINGAPKLVKDEEAVTNIEILENGFAAPSPSVYKLEALHLNE
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure 
TLTMGFIGFGKSANRYHLPYVNTRNNIKIKRIFVRQINEKLAAPYKEKGVYFTTDLDEL
EEEEEEEECCCCCCEEECCEECCCCCEEEEHHHHHHHHHHHCCCHHHCCEEEEECHHHH
LNDKEIQVVTICTPAHTHYELAKKVILAGKSVIVEKPFCDTVEHAKELLALGREKGVVVM
CCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEE
PYQNRRFDGDFLAVKQVIEQGFLGDIIEIESHIDYFRPGSITHEAPKEEGSFYSLGIHTM
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHH
DRMISLFGRPDTVTYDIRNNEMEGAVDNYFDVGLHYGNQLKIKLKTNHVVAKDYPRFIVH
HHHHHHHCCCCEEEEEECCCCCCCCHHHHEEHHEECCCEEEEEEECCEEEECCCCEEEEE
GTNGSFIKYGEDQQENDLKAGIMPESAGFGEDSPMYYGVAKYRNANGDWIEKQIKTPLGD
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHEEECCCCHHHHHHHCCCCCH
YGRFYDAAYETIINGAPKLVKDEEAVTNIEILENGFAAPSPSVYKLEALHLNE
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]