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The map label for this gene is gerPF2 [H]

Identifier: 218233361

GI number: 218233361

Start: 2204024

End: 2204239

Strand: Reverse

Name: gerPF2 [H]

Synonym: BCB4264_A2305

Alternate gene names: 218233361

Gene position: 2204239-2204024 (Counterclockwise)

Preceding gene: 218231717

Following gene: 218234224

Centisome position: 40.68

GC content: 37.5

Gene sequence:

>216_bases
ATGCCATCAGTTGTAGGAAATTTAGTTGTACAAAATAGTAATGGATCATTTAACTTAGGTGATTTCTACAACGTTTCTCC
GAAAGAAAATACGAAAGCTTATAATGGTTCCGGCGCATCAAACGTTGGTTTTGTTGTTAATACTTTTAGCGGTGTTAGCG
CGACCAATACATTTGATTCTGACCTTGCAGATCAAAACCAAGTGGGTACAGCCTAA

Upstream 100 bases:

>100_bases
TCCAAACGTTTTACTATTCCACAATTTTTATTATATGAACCATCTGGACTATAACTCCATATAGTAATGTTAACAACTTA
TTATAAAGCAGGTGAAAATT

Downstream 100 bases:

>100_bases
TCTTATGTTCAACTTTTTGTATAGAAAATTTTAATTTGTCTATACTATAATCAGGCTGTTTGACAGCTCTTATCGATTTT
GGAGTACCCTATCTTTTTCT

Product: spore germination protein GerPF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFSGVSATNTFDSDLADQNQVGTA

Sequences:

>Translated_71_residues
MPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFSGVSATNTFDSDLADQNQVGTA
>Mature_70_residues
PSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFSGVSATNTFDSDLADQNQVGTA

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerPA/gerPF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019618 [H]

Pfam domain/function: PF10676 gerPA [H]

EC number: NA

Molecular weight: Translated: 7323; Mature: 7192

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFSGVSATNTFDS
CCCCCCEEEEECCCCCEECCCCEECCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCC
DLADQNQVGTA
CCCCCCCCCCC
>Mature Secondary Structure 
PSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFSGVSATNTFDS
CCCCCEEEEECCCCCEECCCCEECCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCC
DLADQNQVGTA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]