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The map label for this gene is ywqC [H]

Identifier: 218233291

GI number: 218233291

Start: 1562206

End: 1562949

Strand: Direct

Name: ywqC [H]

Synonym: BCB4264_A1646

Alternate gene names: 218233291

Gene position: 1562206-1562949 (Clockwise)

Preceding gene: 218233555

Following gene: 218232534

Centisome position: 28.83

GC content: 31.45

Gene sequence:

>744_bases
TTGAAGCAAGAAATGAGTATAAAAGATTTTCAACAATTACTGAAAAGAAGATTCGTAACGATTATTTTAACGATGTGTTG
TTTAACCGCTTCTTTAGTTCTTATCTCTATGTATGTTTTAAAGCCGTCATATCAATATTCAACGCAAATTCTTGTTGGGA
ATTTAGATGAGTTTAATAAGGAAAATTCAACAAATAAAACACAAGAAAATAAGCAGCTAGTAACATCGTATGTTGATATT
TTAAAAAGCCCATTAATTATTTCAACAGTCAAAAAAACTTTGGGATTAGAGCAATCAAGTTATGAATTAGCACAAAAAAT
TTCGGTGGTGAATATGGACAACTCACAAATTGTAACTGTTACAGTAAAAGATTCCAATCCGAAAGTCGTGAAAGACATTG
TAAAGACATTGGCAGAGCAATCACAACAAAGTTTTCAACAGTACACAAATGTACAAGGTGTGAAAGTGTTGACGGATCCT
GAGTTACAGGAACAGGCTGAAAAATTGTTTCCAAAATTTCAACTGATCATTCCTATTTCCTTAATTGTTAGTTTTTTTGT
TGGGATAGGTTTAGCTGTATTTCGAGATTATTTTGATGAACGTATATACACGGAACAAGATTTAGAGAAAATAACAACAG
TCTCTGTTATTGGTCACATAAATATGAAACCGAATAGAAAAAAGAAACCTACAGAGGTTGATAAACAATCATCTATATAT
CGAGGTGAACATGTCGATGTTTAG

Upstream 100 bases:

>100_bases
AGTCGGAAAGTATGTAACAAAACAAGTGGATAGAAGAGAGAAAGGGTTATCTGTAAAGAGTGAATTGCAGGATGTTATTC
AGAAAAGGGCGGTGAAATAA

Downstream 100 bases:

>100_bases
GACAAAGAAACAGCTGCCATTCGATCTGCATGATGATCTGATGAAAGAGCAGTTTTATACGGTGTATCACGATCTGAAAA
AATCTGGAAAACAACTGTTC

Product: chain length determinant protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKQEMSIKDFQQLLKRRFVTIILTMCCLTASLVLISMYVLKPSYQYSTQILVGNLDEFNKENSTNKTQENKQLVTSYVDI
LKSPLIISTVKKTLGLEQSSYELAQKISVVNMDNSQIVTVTVKDSNPKVVKDIVKTLAEQSQQSFQQYTNVQGVKVLTDP
ELQEQAEKLFPKFQLIIPISLIVSFFVGIGLAVFRDYFDERIYTEQDLEKITTVSVIGHINMKPNRKKKPTEVDKQSSIY
RGEHVDV

Sequences:

>Translated_247_residues
MKQEMSIKDFQQLLKRRFVTIILTMCCLTASLVLISMYVLKPSYQYSTQILVGNLDEFNKENSTNKTQENKQLVTSYVDI
LKSPLIISTVKKTLGLEQSSYELAQKISVVNMDNSQIVTVTVKDSNPKVVKDIVKTLAEQSQQSFQQYTNVQGVKVLTDP
ELQEQAEKLFPKFQLIIPISLIVSFFVGIGLAVFRDYFDERIYTEQDLEKITTVSVIGHINMKPNRKKKPTEVDKQSSIY
RGEHVDV
>Mature_247_residues
MKQEMSIKDFQQLLKRRFVTIILTMCCLTASLVLISMYVLKPSYQYSTQILVGNLDEFNKENSTNKTQENKQLVTSYVDI
LKSPLIISTVKKTLGLEQSSYELAQKISVVNMDNSQIVTVTVKDSNPKVVKDIVKTLAEQSQQSFQQYTNVQGVKVLTDP
ELQEQAEKLFPKFQLIIPISLIVSFFVGIGLAVFRDYFDERIYTEQDLEKITTVSVIGHINMKPNRKKKPTEVDKQSSIY
RGEHVDV

Specific function: Required for YwqD kinase activity. May bring YwqD and its substrates into contact. Probably involved in the regulation of capsular polysaccharide biosynthesis [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 28240; Mature: 28240

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEMSIKDFQQLLKRRFVTIILTMCCLTASLVLISMYVLKPSYQYSTQILVGNLDEFNK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECHHHHCC
ENSTNKTQENKQLVTSYVDILKSPLIISTVKKTLGLEQSSYELAQKISVVNMDNSQIVTV
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEEEEE
TVKDSNPKVVKDIVKTLAEQSQQSFQQYTNVQGVKVLTDPELQEQAEKLFPKFQLIIPIS
EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHH
LIVSFFVGIGLAVFRDYFDERIYTEQDLEKITTVSVIGHINMKPNRKKKPTEVDKQSSIY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHH
RGEHVDV
CCCCCCC
>Mature Secondary Structure
MKQEMSIKDFQQLLKRRFVTIILTMCCLTASLVLISMYVLKPSYQYSTQILVGNLDEFNK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECHHHHCC
ENSTNKTQENKQLVTSYVDILKSPLIISTVKKTLGLEQSSYELAQKISVVNMDNSQIVTV
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEEEEE
TVKDSNPKVVKDIVKTLAEQSQQSFQQYTNVQGVKVLTDPELQEQAEKLFPKFQLIIPIS
EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHH
LIVSFFVGIGLAVFRDYFDERIYTEQDLEKITTVSVIGHINMKPNRKKKPTEVDKQSSIY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHH
RGEHVDV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]