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The map label for this gene is yqjB [H]

Identifier: 218233206

GI number: 218233206

Start: 781936

End: 782595

Strand: Direct

Name: yqjB [H]

Synonym: BCB4264_A0806

Alternate gene names: 218233206

Gene position: 781936-782595 (Clockwise)

Preceding gene: 218235158

Following gene: 218231417

Centisome position: 14.43

GC content: 35.76

Gene sequence:

>660_bases
TTGTCTTTTTTTGAAAATGGAAATTACAAAAAAACATTTCCAGTAACGACTGGAAGAGATCGTACACCTACGCCTGAAGG
TAATTTTTGTATTATAACTAAATTTAAAAATAAAGAATACCATCGAAAAAAAATACCTGGGGGTGCACCGAATAACCCTC
TTGGTACGAGGTGGCTTGGACTAGATAAGAATGAATATGCAATTCACGGGACGAACCGGGAATGGACGATTGGAAGTAGG
GAATCAAATGGCTGTATTCGTATGCATGACAGGGATATACAATGGTTATATGACCGAGTACAATTACAAACAAAAGTAAT
CATTTCTCGTTTTCATACGAGCCCCGAATATGAAGCGAATAAACTTGGTTATCGCGTTGTGAGCTGGAATGGTCGAAAAA
TAGAAAAAGAACAAATTGGAGTACTTACGTTAGTAGACCGCGCGGATATATATTGGCAAGAACCAAATGGACAGTTAACG
AAAGTGAAAACGGTATTGCCAAATGAAAGATATCCAGTGTACTCAAAACGAAAAGATGGAATATATTATATAGGAAACAA
TTCGTATATTATAGATGAAACAGGAGAGAAAGTTCGTTACGAGCAAATTCCTTCTTCGATTTTAAGTAATATATATAAAC
GGAAATACAATGTTCCGTAA

Upstream 100 bases:

>100_bases
GAAAAAGTTATGTTTCATCATACTATTATTTTTCATCCTACCGGTTAGTGCTTTTGCTAATACAGATCATTTAATATTAG
TAAATCTTACGACGAACCAG

Downstream 100 bases:

>100_bases
TGGCTACCGTATTATAGACGGTAGCTTATTTATACTTGGAGTTTAACTGCAACTATTGTATTTTGCTGAATATAATACAG
TACAGATAGGGGGCGGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSFFENGNYKKTFPVTTGRDRTPTPEGNFCIITKFKNKEYHRKKIPGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSR
ESNGCIRMHDRDIQWLYDRVQLQTKVIISRFHTSPEYEANKLGYRVVSWNGRKIEKEQIGVLTLVDRADIYWQEPNGQLT
KVKTVLPNERYPVYSKRKDGIYYIGNNSYIIDETGEKVRYEQIPSSILSNIYKRKYNVP

Sequences:

>Translated_219_residues
MSFFENGNYKKTFPVTTGRDRTPTPEGNFCIITKFKNKEYHRKKIPGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSR
ESNGCIRMHDRDIQWLYDRVQLQTKVIISRFHTSPEYEANKLGYRVVSWNGRKIEKEQIGVLTLVDRADIYWQEPNGQLT
KVKTVLPNERYPVYSKRKDGIYYIGNNSYIIDETGEKVRYEQIPSSILSNIYKRKYNVP
>Mature_218_residues
SFFENGNYKKTFPVTTGRDRTPTPEGNFCIITKFKNKEYHRKKIPGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRE
SNGCIRMHDRDIQWLYDRVQLQTKVIISRFHTSPEYEANKLGYRVVSWNGRKIEKEQIGVLTLVDRADIYWQEPNGQLTK
VKTVLPNERYPVYSKRKDGIYYIGNNSYIIDETGEKVRYEQIPSSILSNIYKRKYNVP

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 25675; Mature: 25544

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFENGNYKKTFPVTTGRDRTPTPEGNFCIITKFKNKEYHRKKIPGGAPNNPLGTRWLG
CCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCEEEC
LDKNEYAIHGTNREWTIGSRESNGCIRMHDRDIQWLYDRVQLQTKVIISRFHTSPEYEAN
CCCCCEEEECCCCEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KLGYRVVSWNGRKIEKEQIGVLTLVDRADIYWQEPNGQLTKVKTVLPNERYPVYSKRKDG
CCEEEEEECCCCEECHHHCCEEEEEECCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
IYYIGNNSYIIDETGEKVRYEQIPSSILSNIYKRKYNVP
EEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SFFENGNYKKTFPVTTGRDRTPTPEGNFCIITKFKNKEYHRKKIPGGAPNNPLGTRWLG
CCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCEEEC
LDKNEYAIHGTNREWTIGSRESNGCIRMHDRDIQWLYDRVQLQTKVIISRFHTSPEYEAN
CCCCCEEEECCCCEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KLGYRVVSWNGRKIEKEQIGVLTLVDRADIYWQEPNGQLTKVKTVLPNERYPVYSKRKDG
CCEEEEEECCCCEECHHHCCEEEEEECCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
IYYIGNNSYIIDETGEKVRYEQIPSSILSNIYKRKYNVP
EEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]