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The map label for this gene is ypvA [H]

Identifier: 218233175

GI number: 218233175

Start: 1540225

End: 1542162

Strand: Direct

Name: ypvA [H]

Synonym: BCB4264_A1619

Alternate gene names: 218233175

Gene position: 1540225-1542162 (Clockwise)

Preceding gene: 218232584

Following gene: 218232579

Centisome position: 28.42

GC content: 36.64

Gene sequence:

>1938_bases
ATGTTTACTGAGAAGAGATTACCATTTGAAGTAGGAAAACAAGATAATTTTTATGATAAGTTGAATGAGTGGATTGGAGA
TGTGTTTTACGACATCCTTCCGGAAAAAGGCTTTGAAGAGCGTGATGAACAAATTTTTATGGCGTTTCAGTTAGAACGCG
CTTTCCAAGAAAAGAAAGTTATGTTCGCAGAAGCTGGTGTAGGAACAGGGAAAACAATTGTATATCTTCTATATGCAATT
TGTTACGCGCGTTATACTGGGAAACCAGCTATTATTGCTTGTGCAGATGAAACGTTAATTGAACAGCTTGTGAAAGAAGA
AGGAGACATTGCTAAGTTATCTGAAGCATTAGGGCTATCTGTTGATGTAAGGCTTGCAAAATCAATGGATAATTATTTAT
GCTTACGTAAACTTGAAGATGTTATGAGTGGACGAGCTCCAGAAGTAATTGAAGACGTATATTACGAGTTACCACAGTTT
GTATTCGATCATGGTACGATGCAAAACTTTACTCACTATGGTGACAGAAAAGAATTTCCACTTTTAAATGACGAAGAATG
GTCAAAAGTAAATTGGGATTACTTCCAAGATTGCTTTACTTGTGATTCTCGTCATCGTTGTGGACAAACTCTTTCTCGTG
AACATTATCGTAAAGCAGCAGATTTAATTATTTGTTCTCAAGATTTCTATATGGATCATATTTGGACGTACGACGCTCGT
AAGCGTGAAGGGCAAATTCCATTATTACCAGAAAGTAGCTGCGTTGTATTTGATGAAGGACACCTTGTAGAATATGCAGC
TCAAAAAGCTTTAACATATCGTTTAAAGCAAACGATGATGGAGCAACTATTAACGAGATTGCTACAAAACGATATTCGTG
AGGAGTTTGCACATTTAGTAGAAGAAACAATTTGGCAAACTGAACGATTCTTTGATGTGTTACAAGAGAATAAAAAGGAA
ATTGCCGGTTCTGATCGTCTAGAAATTACTGTGACAGAAAAAGTAACAGCTGAAGCGAAACGACTTTATGCAAAAATCGG
TGAAGTTGGAGATGCATTAGTATTCGAAAGTGAAATGCATACAGTAAACACGTATGATTTAAATATTGTTGATGAGCATT
TAGATGTATTAGAACATTCACTTCGTCTGTTCATGCACGAGAAAAATGTAATTACTTGGGGTGAAGAAGGTGATGGTGCC
TTCACGTTAGTTATTATGCCGCGTGCAGTTGAAGAAGTGTTACAAGAGAAAGTATTCTCGAAGAAAATACCGTATATTTT
CTCTTCTGCGACATTATCGAACAACGATTCATTCGCTTTCACAGCTAATAGCCTAGGGGTAAAAGATTACTTGTCATTCT
CAGTTGCTTCACCGTTTGATTACGAAGAGCAAATGACAGTAAACTTACTATCACATACGAAAGAAAATGAATGGGAAAGA
AAGTGTCAATATACACTTGAAAATATACAAAAAACAAATGGACGTACGCTTGTATTATTCCGTACAACGCAAGAGCTTGC
AGCGTTCAAAGAGTATGTAAGTAAAGAGCAAATGTCGGTTCCGTTCTTATATGAAGGAGATCAGGAAATTAGCCAGCTCG
TTTCTCGTTTCCAAAATGAAGAAGAGACTGTACTTTGTGCGGTTCATTTATGGGAAGGTTTAGATATTCCTGGTTCATCA
TTATCGCACGTTATTATTTGGTCTTTACCATTCCCTCCAAACGATCCTGTGTTTGAAGCGAAACGTAAGCACGTAAATGA
TCCATTCTGGGATGTAGATGTACCATATATGATTTTACGACTTCGTCAAGGAATTGGGCGTTTAATTCGTACAAGTGAAG
ATAAAGGTGCCATATCAATTTTCTTATCTAATTCAGAAGATGAGAAAGTAGTTGCAGCTGTGAAAAATGTACTGCCAGTA
GAAGGTAAAGAATTATAA

Upstream 100 bases:

>100_bases
TGAATTTCTATGTATTGCAACAGGGGAAAGCAAATGCATACATATGCGTAGCAGTTGCTATTATCTTTTTATAGAAAAAC
TTTTTGGTTGGAGGCTAAGG

Downstream 100 bases:

>100_bases
GGAGAAAGCTTGGCGCTTGCCAAGCTTTTTTTCTATTATAAAAGGAATTTATGTTTCCGTGTCGAATTAAGTTTGAGGTA
GAAAAAGGAGGCTTTTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MFTEKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKVMFAEAGVGTGKTIVYLLYAI
CYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLSVDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDVYYELPQF
VFDHGTMQNFTHYGDRKEFPLLNDEEWSKVNWDYFQDCFTCDSRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
KREGQIPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLVEETIWQTERFFDVLQENKKE
IAGSDRLEITVTEKVTAEAKRLYAKIGEVGDALVFESEMHTVNTYDLNIVDEHLDVLEHSLRLFMHEKNVITWGEEGDGA
FTLVIMPRAVEEVLQEKVFSKKIPYIFSSATLSNNDSFAFTANSLGVKDYLSFSVASPFDYEEQMTVNLLSHTKENEWER
KCQYTLENIQKTNGRTLVLFRTTQELAAFKEYVSKEQMSVPFLYEGDQEISQLVSRFQNEEETVLCAVHLWEGLDIPGSS
LSHVIIWSLPFPPNDPVFEAKRKHVNDPFWDVDVPYMILRLRQGIGRLIRTSEDKGAISIFLSNSEDEKVVAAVKNVLPV
EGKEL

Sequences:

>Translated_645_residues
MFTEKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKVMFAEAGVGTGKTIVYLLYAI
CYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLSVDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDVYYELPQF
VFDHGTMQNFTHYGDRKEFPLLNDEEWSKVNWDYFQDCFTCDSRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
KREGQIPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLVEETIWQTERFFDVLQENKKE
IAGSDRLEITVTEKVTAEAKRLYAKIGEVGDALVFESEMHTVNTYDLNIVDEHLDVLEHSLRLFMHEKNVITWGEEGDGA
FTLVIMPRAVEEVLQEKVFSKKIPYIFSSATLSNNDSFAFTANSLGVKDYLSFSVASPFDYEEQMTVNLLSHTKENEWER
KCQYTLENIQKTNGRTLVLFRTTQELAAFKEYVSKEQMSVPFLYEGDQEISQLVSRFQNEEETVLCAVHLWEGLDIPGSS
LSHVIIWSLPFPPNDPVFEAKRKHVNDPFWDVDVPYMILRLRQGIGRLIRTSEDKGAISIFLSNSEDEKVVAAVKNVLPV
EGKEL
>Mature_645_residues
MFTEKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKVMFAEAGVGTGKTIVYLLYAI
CYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLSVDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDVYYELPQF
VFDHGTMQNFTHYGDRKEFPLLNDEEWSKVNWDYFQDCFTCDSRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
KREGQIPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLVEETIWQTERFFDVLQENKKE
IAGSDRLEITVTEKVTAEAKRLYAKIGEVGDALVFESEMHTVNTYDLNIVDEHLDVLEHSLRLFMHEKNVITWGEEGDGA
FTLVIMPRAVEEVLQEKVFSKKIPYIFSSATLSNNDSFAFTANSLGVKDYLSFSVASPFDYEEQMTVNLLSHTKENEWER
KCQYTLENIQKTNGRTLVLFRTTQELAAFKEYVSKEQMSVPFLYEGDQEISQLVSRFQNEEETVLCAVHLWEGLDIPGSS
LSHVIIWSLPFPPNDPVFEAKRKHVNDPFWDVDVPYMILRLRQGIGRLIRTSEDKGAISIFLSNSEDEKVVAAVKNVLPV
EGKEL

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=608, Percent_Identity=26.6447368421053, Blast_Score=175, Evalue=9e-45,
Organism=Escherichia coli, GI1787018, Length=718, Percent_Identity=23.6768802228412, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014013
- InterPro:   IPR006555 [H]

Pfam domain/function: NA

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 74716; Mature: 74716

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTEKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKV
CCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHE
MFAEAGVGTGKTIVYLLYAICYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCC
VDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDVYYELPQFVFDHGTMQNFTHYGDRKEFP
EEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
LLNDEEWSKVNWDYFQDCFTCDSRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEECCCHHHHHEEECCCC
KREGQIPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLV
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EETIWQTERFFDVLQENKKEIAGSDRLEITVTEKVTAEAKRLYAKIGEVGDALVFESEMH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEECCCC
TVNTYDLNIVDEHLDVLEHSLRLFMHEKNVITWGEEGDGAFTLVIMPRAVEEVLQEKVFS
EEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHH
KKIPYIFSSATLSNNDSFAFTANSLGVKDYLSFSVASPFDYEEQMTVNLLSHTKENEWER
HCCCCEEECCEECCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHH
KCQYTLENIQKTNGRTLVLFRTTQELAAFKEYVSKEQMSVPFLYEGDQEISQLVSRFQNE
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCC
EETVLCAVHLWEGLDIPGSSLSHVIIWSLPFPPNDPVFEAKRKHVNDPFWDVDVPYMILR
CCEEEEEEEHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHH
LRQGIGRLIRTSEDKGAISIFLSNSEDEKVVAAVKNVLPVEGKEL
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFTEKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKV
CCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHE
MFAEAGVGTGKTIVYLLYAICYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCC
VDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDVYYELPQFVFDHGTMQNFTHYGDRKEFP
EEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
LLNDEEWSKVNWDYFQDCFTCDSRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEECCCHHHHHEEECCCC
KREGQIPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLV
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EETIWQTERFFDVLQENKKEIAGSDRLEITVTEKVTAEAKRLYAKIGEVGDALVFESEMH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEECCCC
TVNTYDLNIVDEHLDVLEHSLRLFMHEKNVITWGEEGDGAFTLVIMPRAVEEVLQEKVFS
EEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHH
KKIPYIFSSATLSNNDSFAFTANSLGVKDYLSFSVASPFDYEEQMTVNLLSHTKENEWER
HCCCCEEECCEECCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHH
KCQYTLENIQKTNGRTLVLFRTTQELAAFKEYVSKEQMSVPFLYEGDQEISQLVSRFQNE
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCC
EETVLCAVHLWEGLDIPGSSLSHVIIWSLPFPPNDPVFEAKRKHVNDPFWDVDVPYMILR
CCEEEEEEEHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHH
LRQGIGRLIRTSEDKGAISIFLSNSEDEKVVAAVKNVLPVEGKEL
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]