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The map label for this gene is yhaO [H]

Identifier: 218233086

GI number: 218233086

Start: 1023271

End: 1024512

Strand: Direct

Name: yhaO [H]

Synonym: BCB4264_A1050

Alternate gene names: 218233086

Gene position: 1023271-1024512 (Clockwise)

Preceding gene: 218232580

Following gene: 218233877

Centisome position: 18.88

GC content: 39.69

Gene sequence:

>1242_bases
GTGAAACAAGTAAAGTTTATACATGCGGCTGATTTGCATTTGGATAGTCCGTTTAAAGGGATGGAGATGAATGTTGCGCA
GTCTGTTTGGGAGAGAATGAAGCAAAGTACGTTTGAATCATTTGAGCGTATTATTGATAAAGCAATTCAAGAGCGCGTTG
ATTTCGTATTACTAGCTGGGGATTTGTATGATGGGGAGACGAGAAGTTTGAGGGCGCAAGTGTTTGTGCGTGAGCAAATG
AAGAGACTTTCGCAGTACGATATCCCTGTTTTTATTATTCACGGTAACCATGATCATTTAGGAGGAAGCTGGGCAGCAAT
TGAGTTTCCGGAAAATGTTCATGTATTTACTGAGCCTTATGTAGAAGAGAAATCATTTTATAAAAATGGTGAGCTATTAG
CTTCTATTTATGGTTTTAGTTATTTGCAGCAAGCGGTAACGGATAATATGACAGCGCAGTATACGAAAATGAGTGATGCG
CCTTTTCATATTGGCATGCTTCACGGAAGTGTGGAAGGAGATGCAGAGCATAATCGCTATGCACCGTTTCAAATTCGTGA
GTTGAAAGAAAAACAGTTTGATTATTGGGCTCTTGGCCATATACATAAACGTGAAATTTTATCAGAAGAACCATGCATTA
TTTATCCAGGGAACATACAAGGTCGTCATCGTAAGGAAACAGGCGAGAAGGGTGCGTACCTTATTGAACTTACGAAACAA
GGAAAGCAGTGTTCATTTTTCCATACGGCAGATGTTGTATGGGATGAAATCGAAGTTTGTATTGATAGACTTGAAACTGT
TGATGAACTTATGACGAGCCTATCTACTGCGATGAATGAATGCCGAAGAGAAGAGGAAGGTACGCTATTAACTGTCGTAT
TCACAGGACAAGGCCCACTTTCCCCTTATTTGCGTGACGAAAAGCGCGTGGAAGAGATTTTTCACATTTTAGCATCTGGC
GAAGAGCGAAAAGATTTTGTATATGCGATGAAGTGGAAAAATGAGACGGTTTCTTTTGCGGAAATCGAACGTTTGAAAGC
GGAAAATCATTTCGTAGGTAGTGTGCTAAAGGAGTTAGAAGCTTTCAGCAATATGGACGGAGTATTGCGCACCATTTGGA
CATCTCCTGTAGCGCGTAATAGTATTGAATCTTTTACAGAAGAAGAGAAGAAAGAGATTCAAAAGGAAGCAGAAAATATT
ATTTTAGAGCAATTATTCCAGCAAGAGAGGGATAAAAAATGA

Upstream 100 bases:

>100_bases
TTAATCATCGAGAATATTTTTATTCTCGATGATTATTAGTTTTCAGCGATTTTAATTTTGATAAAATGAAACTTTTGAAA
GATAGGAAGGATCGTTATTT

Downstream 100 bases:

>100_bases
GAATTGAAAAACTCCATATTTATGGGTACGGAAAATTAGAAAATGTGGAAATGGATCTTTCCTTGCTGACGGTGTTATAT
GGTGAAAATGAAGCGGGGAA

Product: DNA repair exonuclease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKQVKFIHAADLHLDSPFKGMEMNVAQSVWERMKQSTFESFERIIDKAIQERVDFVLLAGDLYDGETRSLRAQVFVREQM
KRLSQYDIPVFIIHGNHDHLGGSWAAIEFPENVHVFTEPYVEEKSFYKNGELLASIYGFSYLQQAVTDNMTAQYTKMSDA
PFHIGMLHGSVEGDAEHNRYAPFQIRELKEKQFDYWALGHIHKREILSEEPCIIYPGNIQGRHRKETGEKGAYLIELTKQ
GKQCSFFHTADVVWDEIEVCIDRLETVDELMTSLSTAMNECRREEEGTLLTVVFTGQGPLSPYLRDEKRVEEIFHILASG
EERKDFVYAMKWKNETVSFAEIERLKAENHFVGSVLKELEAFSNMDGVLRTIWTSPVARNSIESFTEEEKKEIQKEAENI
ILEQLFQQERDKK

Sequences:

>Translated_413_residues
MKQVKFIHAADLHLDSPFKGMEMNVAQSVWERMKQSTFESFERIIDKAIQERVDFVLLAGDLYDGETRSLRAQVFVREQM
KRLSQYDIPVFIIHGNHDHLGGSWAAIEFPENVHVFTEPYVEEKSFYKNGELLASIYGFSYLQQAVTDNMTAQYTKMSDA
PFHIGMLHGSVEGDAEHNRYAPFQIRELKEKQFDYWALGHIHKREILSEEPCIIYPGNIQGRHRKETGEKGAYLIELTKQ
GKQCSFFHTADVVWDEIEVCIDRLETVDELMTSLSTAMNECRREEEGTLLTVVFTGQGPLSPYLRDEKRVEEIFHILASG
EERKDFVYAMKWKNETVSFAEIERLKAENHFVGSVLKELEAFSNMDGVLRTIWTSPVARNSIESFTEEEKKEIQKEAENI
ILEQLFQQERDKK
>Mature_413_residues
MKQVKFIHAADLHLDSPFKGMEMNVAQSVWERMKQSTFESFERIIDKAIQERVDFVLLAGDLYDGETRSLRAQVFVREQM
KRLSQYDIPVFIIHGNHDHLGGSWAAIEFPENVHVFTEPYVEEKSFYKNGELLASIYGFSYLQQAVTDNMTAQYTKMSDA
PFHIGMLHGSVEGDAEHNRYAPFQIRELKEKQFDYWALGHIHKREILSEEPCIIYPGNIQGRHRKETGEKGAYLIELTKQ
GKQCSFFHTADVVWDEIEVCIDRLETVDELMTSLSTAMNECRREEEGTLLTVVFTGQGPLSPYLRDEKRVEEIFHILASG
EERKDFVYAMKWKNETVSFAEIERLKAENHFVGSVLKELEAFSNMDGVLRTIWTSPVARNSIESFTEEEKKEIQKEAENI
ILEQLFQQERDKK

Specific function: Unknown

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR014576 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 47972; Mature: 47972

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVKFIHAADLHLDSPFKGMEMNVAQSVWERMKQSTFESFERIIDKAIQERVDFVLLAG
CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEC
DLYDGETRSLRAQVFVREQMKRLSQYDIPVFIIHGNHDHLGGSWAAIEFPENVHVFTEPY
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCEEECCCC
VEEKSFYKNGELLASIYGFSYLQQAVTDNMTAQYTKMSDAPFHIGMLHGSVEGDAEHNRY
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCEEEEEEECCCCCCCCCCCC
APFQIRELKEKQFDYWALGHIHKREILSEEPCIIYPGNIQGRHRKETGEKGAYLIELTKQ
CCHHHHHHHHHCCCCHHHCCHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECC
GKQCSFFHTADVVWDEIEVCIDRLETVDELMTSLSTAMNECRREEEGTLLTVVFTGQGPL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
SPYLRDEKRVEEIFHILASGEERKDFVYAMKWKNETVSFAEIERLKAENHFVGSVLKELE
CHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHH
AFSNMDGVLRTIWTSPVARNSIESFTEEEKKEIQKEAENIILEQLFQQERDKK
HHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQVKFIHAADLHLDSPFKGMEMNVAQSVWERMKQSTFESFERIIDKAIQERVDFVLLAG
CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEC
DLYDGETRSLRAQVFVREQMKRLSQYDIPVFIIHGNHDHLGGSWAAIEFPENVHVFTEPY
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCEEECCCC
VEEKSFYKNGELLASIYGFSYLQQAVTDNMTAQYTKMSDAPFHIGMLHGSVEGDAEHNRY
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCEEEEEEECCCCCCCCCCCC
APFQIRELKEKQFDYWALGHIHKREILSEEPCIIYPGNIQGRHRKETGEKGAYLIELTKQ
CCHHHHHHHHHCCCCHHHCCHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECC
GKQCSFFHTADVVWDEIEVCIDRLETVDELMTSLSTAMNECRREEEGTLLTVVFTGQGPL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
SPYLRDEKRVEEIFHILASGEERKDFVYAMKWKNETVSFAEIERLKAENHFVGSVLKELE
CHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHH
AFSNMDGVLRTIWTSPVARNSIESFTEEEKKEIQKEAENIILEQLFQQERDKK
HHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]