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The map label for this gene is pbpX [H]

Identifier: 218233055

GI number: 218233055

Start: 3379142

End: 3380269

Strand: Reverse

Name: pbpX [H]

Synonym: BCB4264_A3498

Alternate gene names: 218233055

Gene position: 3380269-3379142 (Counterclockwise)

Preceding gene: 218234152

Following gene: 218233904

Centisome position: 62.38

GC content: 32.98

Gene sequence:

>1128_bases
ATGTTAAAGAAATGGTTAATCGTTTTCTTTATTTTTGCAGTTTTTTGTGGAAGTATTGTTACACTAATACATGCAAATAA
AGGAAAAAAATATGATGCAAAGGCATTTTCTAATGTAAATAGTAAGCAAAAAGATGTTAAGCAGGAAATTGATGCGAATG
AGAAAAAGCGTTATGAAATTGCAGCTGGAAAACTAGATCAGTACTTAAAAGATAAAGGATTTAATGGAAGTGTTCTTGTA
GCAAGTAAAGGTCATGTGATTTTACGAAAAGGCTACGGTTATGCGAATGTGAAAGATCAAGTATTAACAACGCCAAGAAC
GAAATATCGCATTGGTTCTATTACGAAAACAGTTGTTGCAATATCTATTATGCAACTAAAAGAAAAAGGGAAGTTGAACA
TTGAAGACAATGTAAATAAATATATCCCATCGTTTCCAGCAGATAAAAATATTACGTTACGAAACTTGTTAACACATACG
TCTGGATTACCAGAACAGGGACAAGGTAGTGTTGACGCAGCATCACGGTTAAAATTAGTAACGTGGATTGGGGCACAAAC
GTTACAATTTCCAGCAGGGACAGGATGGAAATATACAGATTATAATTATATGGTGCTTGCATATATTGTAGAAAAAATAT
CGAATAAACCACTTGCTGAATATGTGAAAGAAAATATTTTGACTCCCGTTGAAATGAATGAATCTGGAATGGGCGCAACA
CTTCCAGAAGATATTTTCTTAGCAGAAGGGTATACGAAAAAAGATAATAAGTTAATAGCCACGCCGCGCTTAAAAATGAA
CTGGCTGTATGGTTGTGGTGAAATGTATACGACTGTTGAAGATATGAAAAAGTTAGATGAAGCTATTATGGATGGTAAAC
TACTTTCTAAACAAAGTGTATCAGATATGTTTTCTGCATCACCTGCAAGAAAATATGGATTTAGTTTTTATATTTACCCA
GATTATTATCATAACCACGGTGTATTAGCTGGCTGGAACACTTTTAATAATTTTAACTGGGATAAACGAACGTTTGTCAT
ATTATTTTCTAACGTCCAAAATGGTATGAATGACGCATTTAATCAAGAATTCAGGAAAATGGCGAATGATTTAATAGAAG
GAAAATAA

Upstream 100 bases:

>100_bases
GAGTGAATATTAAATAATATTATAATATACTTGATAATTAAAAGATATAAAATAGAATGGATGTACGTTAAGTGAAACTA
GATAAAAGAGGGTTCCTAGT

Downstream 100 bases:

>100_bases
TTATAAAAAATCGGTATTGATATGTAATTATCAATACCGATTTTTTTATTTTGTAAAGTTTTACTTACTGAATAAAGTGA
AACTTTATTCAGTGGAGGGG

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MLKKWLIVFFIFAVFCGSIVTLIHANKGKKYDAKAFSNVNSKQKDVKQEIDANEKKRYEIAAGKLDQYLKDKGFNGSVLV
ASKGHVILRKGYGYANVKDQVLTTPRTKYRIGSITKTVVAISIMQLKEKGKLNIEDNVNKYIPSFPADKNITLRNLLTHT
SGLPEQGQGSVDAASRLKLVTWIGAQTLQFPAGTGWKYTDYNYMVLAYIVEKISNKPLAEYVKENILTPVEMNESGMGAT
LPEDIFLAEGYTKKDNKLIATPRLKMNWLYGCGEMYTTVEDMKKLDEAIMDGKLLSKQSVSDMFSASPARKYGFSFYIYP
DYYHNHGVLAGWNTFNNFNWDKRTFVILFSNVQNGMNDAFNQEFRKMANDLIEGK

Sequences:

>Translated_375_residues
MLKKWLIVFFIFAVFCGSIVTLIHANKGKKYDAKAFSNVNSKQKDVKQEIDANEKKRYEIAAGKLDQYLKDKGFNGSVLV
ASKGHVILRKGYGYANVKDQVLTTPRTKYRIGSITKTVVAISIMQLKEKGKLNIEDNVNKYIPSFPADKNITLRNLLTHT
SGLPEQGQGSVDAASRLKLVTWIGAQTLQFPAGTGWKYTDYNYMVLAYIVEKISNKPLAEYVKENILTPVEMNESGMGAT
LPEDIFLAEGYTKKDNKLIATPRLKMNWLYGCGEMYTTVEDMKKLDEAIMDGKLLSKQSVSDMFSASPARKYGFSFYIYP
DYYHNHGVLAGWNTFNNFNWDKRTFVILFSNVQNGMNDAFNQEFRKMANDLIEGK
>Mature_375_residues
MLKKWLIVFFIFAVFCGSIVTLIHANKGKKYDAKAFSNVNSKQKDVKQEIDANEKKRYEIAAGKLDQYLKDKGFNGSVLV
ASKGHVILRKGYGYANVKDQVLTTPRTKYRIGSITKTVVAISIMQLKEKGKLNIEDNVNKYIPSFPADKNITLRNLLTHT
SGLPEQGQGSVDAASRLKLVTWIGAQTLQFPAGTGWKYTDYNYMVLAYIVEKISNKPLAEYVKENILTPVEMNESGMGAT
LPEDIFLAEGYTKKDNKLIATPRLKMNWLYGCGEMYTTVEDMKKLDEAIMDGKLLSKQSVSDMFSASPARKYGFSFYIYP
DYYHNHGVLAGWNTFNNFNWDKRTFVILFSNVQNGMNDAFNQEFRKMANDLIEGK

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Note=Localizes to the division septum during vegetative growth, and accumulates at the prespore during sporulation [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-lactamase family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=221, Percent_Identity=25.7918552036199, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1786574, Length=269, Percent_Identity=25.2788104089219, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17550934, Length=190, Percent_Identity=27.3684210526316, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI115533026, Length=93, Percent_Identity=35.4838709677419, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 42500; Mature: 42500

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKWLIVFFIFAVFCGSIVTLIHANKGKKYDAKAFSNVNSKQKDVKQEIDANEKKRYEI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCHHEEEH
AAGKLDQYLKDKGFNGSVLVASKGHVILRKGYGYANVKDQVLTTPRTKYRIGSITKTVVA
HHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCCHHEECCCCCCEEHHHHHHHHHH
ISIMQLKEKGKLNIEDNVNKYIPSFPADKNITLRNLLTHTSGLPEQGQGSVDAASRLKLV
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHEEEE
TWIGAQTLQFPAGTGWKYTDYNYMVLAYIVEKISNKPLAEYVKENILTPVEMNESGMGAT
EEECCCEEECCCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCC
LPEDIFLAEGYTKKDNKLIATPRLKMNWLYGCGEMYTTVEDMKKLDEAIMDGKLLSKQSV
CCCCEEEECCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
SDMFSASPARKYGFSFYIYPDYYHNHGVLAGWNTFNNFNWDKRTFVILFSNVQNGMNDAF
HHHHHCCCHHHHCEEEEEECCEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHH
NQEFRKMANDLIEGK
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKKWLIVFFIFAVFCGSIVTLIHANKGKKYDAKAFSNVNSKQKDVKQEIDANEKKRYEI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCHHEEEH
AAGKLDQYLKDKGFNGSVLVASKGHVILRKGYGYANVKDQVLTTPRTKYRIGSITKTVVA
HHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCCHHEECCCCCCEEHHHHHHHHHH
ISIMQLKEKGKLNIEDNVNKYIPSFPADKNITLRNLLTHTSGLPEQGQGSVDAASRLKLV
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHEEEE
TWIGAQTLQFPAGTGWKYTDYNYMVLAYIVEKISNKPLAEYVKENILTPVEMNESGMGAT
EEECCCEEECCCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCC
LPEDIFLAEGYTKKDNKLIATPRLKMNWLYGCGEMYTTVEDMKKLDEAIMDGKLLSKQSV
CCCCEEEECCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
SDMFSASPARKYGFSFYIYPDYYHNHGVLAGWNTFNNFNWDKRTFVILFSNVQNGMNDAF
HHHHHCCCHHHHCEEEEEECCEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHH
NQEFRKMANDLIEGK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]