Click here to switch to the map view.

The map label for this gene is 218232855

Identifier: 218232855

GI number: 218232855

Start: 1672552

End: 1672962

Strand: Reverse

Name: 218232855

Synonym: BCB4264_A1765

Alternate gene names: NA

Gene position: 1672962-1672552 (Counterclockwise)

Preceding gene: 218232672

Following gene: 218234589

Centisome position: 30.87

GC content: 31.14

Gene sequence:

>411_bases
ATGAACAACATTAATCAACATTGGGAGAGCATTTATTATCACTTACGATACGAATACGAGGACAACCTTTCCCACCAAGC
AATTCGTATTTTACAAATCGTTTCTCGTGAGAAAGATATAACAATTGGAAAAGTCGCTACTGAGCTTAGTCTTTCTCATA
ACACAGCATCTGAACATATAAAACGCCTTATTCAAAAGGGTTTCATCGTTAAAGAGAGAAATAAAAAAGATGAAAGAGTG
GTAAACCTTACATTAACAATTGAAGGAATTGAAGTATTAGAAAAACATACTTTACTAGATAAAGAAAAGATAAAAATATT
AGAATCACAGTTATCAAAAGAAGAACAACAATTAATTGAAAAAGCATTTTCCTTATTAGCGAAGGAGGCAAAATATGCAT
TTCCTCGTTAA

Upstream 100 bases:

>100_bases
AAAATAAACTTTTTCAACATTTTTTATCCAAATAAAAGGATTTTATTTCTAAAACAACGAATATATCTTACTATACGATA
TAAAAAGGAGATTTATTATT

Downstream 100 bases:

>100_bases
AGTAATCGTTTCGGCACTTATTATCGGCGTTATCACTGAAGTCGCTAAACATTACAGTACGATAGGTGGCTTTATTGCTG
CCCTTCCTCTCGTGAGTTTA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TrmB; Regulatory Protein MarR

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MNNINQHWESIYYHLRYEYEDNLSHQAIRILQIVSREKDITIGKVATELSLSHNTASEHIKRLIQKGFIVKERNKKDERV
VNLTLTIEGIEVLEKHTLLDKEKIKILESQLSKEEQQLIEKAFSLLAKEAKYAFPR

Sequences:

>Translated_136_residues
MNNINQHWESIYYHLRYEYEDNLSHQAIRILQIVSREKDITIGKVATELSLSHNTASEHIKRLIQKGFIVKERNKKDERV
VNLTLTIEGIEVLEKHTLLDKEKIKILESQLSKEEQQLIEKAFSLLAKEAKYAFPR
>Mature_136_residues
MNNINQHWESIYYHLRYEYEDNLSHQAIRILQIVSREKDITIGKVATELSLSHNTASEHIKRLIQKGFIVKERNKKDERV
VNLTLTIEGIEVLEKHTLLDKEKIKILESQLSKEEQQLIEKAFSLLAKEAKYAFPR

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16042; Mature: 16042

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNINQHWESIYYHLRYEYEDNLSHQAIRILQIVSREKDITIGKVATELSLSHNTASEHI
CCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHH
KRLIQKGFIVKERNKKDERVVNLTLTIEGIEVLEKHTLLDKEKIKILESQLSKEEQQLIE
HHHHHCCCEEECCCCCCCEEEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KAFSLLAKEAKYAFPR
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNINQHWESIYYHLRYEYEDNLSHQAIRILQIVSREKDITIGKVATELSLSHNTASEHI
CCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHH
KRLIQKGFIVKERNKKDERVVNLTLTIEGIEVLEKHTLLDKEKIKILESQLSKEEQQLIE
HHHHHCCCEEECCCCCCCEEEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KAFSLLAKEAKYAFPR
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA