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The map label for this gene is glpP [H]

Identifier: 218232750

GI number: 218232750

Start: 1038281

End: 1038841

Strand: Direct

Name: glpP [H]

Synonym: BCB4264_A1064

Alternate gene names: 218232750

Gene position: 1038281-1038841 (Clockwise)

Preceding gene: 218233356

Following gene: 218235696

Centisome position: 19.16

GC content: 39.04

Gene sequence:

>561_bases
ATGGAATTTCATGAACAGAAAATTTTGCCGGCAGTGAGGCAAATTAAAGATTTGGAAAAGCTATTACATAGTTCGTATGA
ATATATCGTTATTTTAGATATTCATGTCGGCCAATTGAAGAGTGTTATATCGCTTGCGAAGCAATATTGTAAAAAGGTGT
TTTTACATGTGGATCTAATTCATGGTTTGCAGAGTGATGGGCATGCGACGGAATATTTATGTCAGGAGTTTAGACCGTAC
GGGTTACTTTCAACAAAGGCGAGCGTTATTATGAAGGCGAAGCAAAAAGGTGTTGTGGCAATACAACGCATCTTTTTAAT
CGATTCGAGTGCGATGGAGAAGAGCTGCAATCTTTTAGATAAGACGAAACCGGATTATATTGAGGTACTTCCTGGAGCAT
TAACGGATGTTATCGCTGAAGTGAAAGAGCGTACTGGTGTACCGATTTTAGCAGGTGGTTTTATTCGTACTGTAGAAGAT
GTGGAAAGAGCTTTAAACGCTGGTGCGACAGCAATTACGACATCAAAACGCGAACTATGGAAACATTACCAAAAAAAGTG
A

Upstream 100 bases:

>100_bases
TAAGAGAAAGATTTGAAAGAAATCCCCGACACTAGCTGTTCTTTTCACTTAAATTGTGTACTATAAAGGATAGGATGACA
TAAAGAAGGGGACGTATAGA

Downstream 100 bases:

>100_bases
CGAAAATGTGAATTTTTTCGTTGACACCGCTTTCATTTACGGTTAACATTATAGACAAGTTAATAAACGTGACGGAGAAA
AGTAGAGATCCACATTTCAT

Product: glycerol uptake operon antiterminator regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MEFHEQKILPAVRQIKDLEKLLHSSYEYIVILDIHVGQLKSVISLAKQYCKKVFLHVDLIHGLQSDGHATEYLCQEFRPY
GLLSTKASVIMKAKQKGVVAIQRIFLIDSSAMEKSCNLLDKTKPDYIEVLPGALTDVIAEVKERTGVPILAGGFIRTVED
VERALNAGATAITTSKRELWKHYQKK

Sequences:

>Translated_186_residues
MEFHEQKILPAVRQIKDLEKLLHSSYEYIVILDIHVGQLKSVISLAKQYCKKVFLHVDLIHGLQSDGHATEYLCQEFRPY
GLLSTKASVIMKAKQKGVVAIQRIFLIDSSAMEKSCNLLDKTKPDYIEVLPGALTDVIAEVKERTGVPILAGGFIRTVED
VERALNAGATAITTSKRELWKHYQKK
>Mature_186_residues
MEFHEQKILPAVRQIKDLEKLLHSSYEYIVILDIHVGQLKSVISLAKQYCKKVFLHVDLIHGLQSDGHATEYLCQEFRPY
GLLSTKASVIMKAKQKGVVAIQRIFLIDSSAMEKSCNLLDKTKPDYIEVLPGALTDVIAEVKERTGVPILAGGFIRTVED
VERALNAGATAITTSKRELWKHYQKK

Specific function: In the presence of glycerol 3-phosphate, this protein is thought to enhance transcription [H]

COG id: COG1954

COG function: function code K; Glycerol-3-phosphate responsive antiterminator (mRNA-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygcP [H]

Homologues:

Organism=Escherichia coli, GI1789127, Length=183, Percent_Identity=28.4153005464481, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006699 [H]

Pfam domain/function: PF04309 G3P_antiterm [H]

EC number: NA

Molecular weight: Translated: 20963; Mature: 20963

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFHEQKILPAVRQIKDLEKLLHSSYEYIVILDIHVGQLKSVISLAKQYCKKVFLHVDLI
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
HGLQSDGHATEYLCQEFRPYGLLSTKASVIMKAKQKGVVAIQRIFLIDSSAMEKSCNLLD
HHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHH
KTKPDYIEVLPGALTDVIAEVKERTGVPILAGGFIRTVEDVERALNAGATAITTSKRELW
CCCCHHHHHCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCHHEECCHHHHH
KHYQKK
HHHHCC
>Mature Secondary Structure
MEFHEQKILPAVRQIKDLEKLLHSSYEYIVILDIHVGQLKSVISLAKQYCKKVFLHVDLI
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
HGLQSDGHATEYLCQEFRPYGLLSTKASVIMKAKQKGVVAIQRIFLIDSSAMEKSCNLLD
HHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHH
KTKPDYIEVLPGALTDVIAEVKERTGVPILAGGFIRTVEDVERALNAGATAITTSKRELW
CCCCHHHHHCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCHHEECCHHHHH
KHYQKK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8436953; 9579061; 9384377 [H]