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The map label for this gene is ybgI [C]

Identifier: 218232746

GI number: 218232746

Start: 3298463

End: 3299212

Strand: Reverse

Name: ybgI [C]

Synonym: BCB4264_A3419

Alternate gene names: 218232746

Gene position: 3299212-3298463 (Counterclockwise)

Preceding gene: 218231126

Following gene: 218234650

Centisome position: 60.88

GC content: 33.47

Gene sequence:

>750_bases
ATGAATATAAAGAAGTTTAACGAACATATAACATCACTATTTGGAGAGGACCTTCATAAATACGGCGATGGTGAATATGG
TTTTACTCATATAAGTAAAGATGAATTTCACAAAATCGGTTACACAACAAATTTGACAGTAGAGACGATTGAAGAAGCGT
ATAAAAATGGAGTCGATATGATAGTTACACATCATGCGCCGTGGCGTTTTTTATTTGGTATGGAAGAGGCTTGTATTGAG
AAATTGAAGCAATATGAAATGAATCATTTTTGGATTCACTTGCCGTTAGATTTTGTAAAGTTTGGCACGTGTACTTCGTT
ATTTAACGAAATTGGGATAGATACAATACTGGAATATTCCACGTATGAGGAAGAAGAACTACCGGGAATAGGAGAATATA
AAGAATCGATTCCTTTTTCAAACTTAGTTGGAAAACTTGAAGAAAGAATGGAAGAGAAAGTGAAGAGCTGGAGAAATCAC
GATAAACCAGTAAAACGAATCGCGATTTTAACCGGTGCAGGAAACAATACAAATTTGATTGAACGTGCATTAGAAAAAGG
GTGTGACACGTACATAACAGGTGAAAAAACATTATATACAGTTCAACATGCGAAATTTAAAGGGATTAATTTAATTGTAG
GCAGTCATACGTTTACAGAAGTGTTTGGTGTAGAAAGTTTGGTTCTTAAGTTAAAAGAAAGAGATAATTCAATAGAAATT
ACTAGATTAAATGAAGATCATTTGGAGTGA

Upstream 100 bases:

>100_bases
AAAAATTCAGGTTTCATGGTGTCCTCCTATATGTATGTAACGTTTTTATTTAGTATTTCCTTATTTTTGAAATATAAAAG
TAAATGAAAGGAGAAATAAA

Downstream 100 bases:

>100_bases
AGAAATCACATCGCATTACCATAAATGGAATGAACTTTATGATGGAATATTGAAGGAAGCAGTTGAAATGAAATAAAATT
ATCTTTTGTTATATTAAGAT

Product: SMS protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNIKKFNEHITSLFGEDLHKYGDGEYGFTHISKDEFHKIGYTTNLTVETIEEAYKNGVDMIVTHHAPWRFLFGMEEACIE
KLKQYEMNHFWIHLPLDFVKFGTCTSLFNEIGIDTILEYSTYEEEELPGIGEYKESIPFSNLVGKLEERMEEKVKSWRNH
DKPVKRIAILTGAGNNTNLIERALEKGCDTYITGEKTLYTVQHAKFKGINLIVGSHTFTEVFGVESLVLKLKERDNSIEI
TRLNEDHLE

Sequences:

>Translated_249_residues
MNIKKFNEHITSLFGEDLHKYGDGEYGFTHISKDEFHKIGYTTNLTVETIEEAYKNGVDMIVTHHAPWRFLFGMEEACIE
KLKQYEMNHFWIHLPLDFVKFGTCTSLFNEIGIDTILEYSTYEEEELPGIGEYKESIPFSNLVGKLEERMEEKVKSWRNH
DKPVKRIAILTGAGNNTNLIERALEKGCDTYITGEKTLYTVQHAKFKGINLIVGSHTFTEVFGVESLVLKLKERDNSIEI
TRLNEDHLE
>Mature_249_residues
MNIKKFNEHITSLFGEDLHKYGDGEYGFTHISKDEFHKIGYTTNLTVETIEEAYKNGVDMIVTHHAPWRFLFGMEEACIE
KLKQYEMNHFWIHLPLDFVKFGTCTSLFNEIGIDTILEYSTYEEEELPGIGEYKESIPFSNLVGKLEERMEEKVKSWRNH
DKPVKRIAILTGAGNNTNLIERALEKGCDTYITGEKTLYTVQHAKFKGINLIVGSHTFTEVFGVESLVLKLKERDNSIEI
TRLNEDHLE

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=238, Percent_Identity=27.3109243697479, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 28817; Mature: 28817

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKKFNEHITSLFGEDLHKYGDGEYGFTHISKDEFHKIGYTTNLTVETIEEAYKNGVDM
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHCCCCCCCHHHHHHHHHHCCCEE
IVTHHAPWRFLFGMEEACIEKLKQYEMNHFWIHLPLDFVKFGTCTSLFNEIGIDTILEYS
EEECCCCHHHHHCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCHHHHHHCC
TYEEEELPGIGEYKESIPFSNLVGKLEERMEEKVKSWRNHDKPVKRIAILTGAGNNTNLI
CCCHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCHHHH
ERALEKGCDTYITGEKTLYTVQHAKFKGINLIVGSHTFTEVFGVESLVLKLKERDNSIEI
HHHHHCCCCEEECCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEE
TRLNEDHLE
EECCHHCCC
>Mature Secondary Structure
MNIKKFNEHITSLFGEDLHKYGDGEYGFTHISKDEFHKIGYTTNLTVETIEEAYKNGVDM
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHCCCCCCCHHHHHHHHHHCCCEE
IVTHHAPWRFLFGMEEACIEKLKQYEMNHFWIHLPLDFVKFGTCTSLFNEIGIDTILEYS
EEECCCCHHHHHCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCHHHHHHCC
TYEEEELPGIGEYKESIPFSNLVGKLEERMEEKVKSWRNHDKPVKRIAILTGAGNNTNLI
CCCHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCHHHH
ERALEKGCDTYITGEKTLYTVQHAKFKGINLIVGSHTFTEVFGVESLVLKLKERDNSIEI
HHHHHCCCCEEECCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEE
TRLNEDHLE
EECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]