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The map label for this gene is yabB [H]

Identifier: 218232737

GI number: 218232737

Start: 38854

End: 39594

Strand: Direct

Name: yabB [H]

Synonym: BCB4264_A0039

Alternate gene names: 218232737

Gene position: 38854-39594 (Clockwise)

Preceding gene: 218231790

Following gene: 218233332

Centisome position: 0.72

GC content: 34.14

Gene sequence:

>741_bases
ATGAATTTATATGAAGATGAACGTTTAGATTACTTATTAGCACAAGACATGAAGATTATACAAAGCCCATCAGTATTTAA
TTTTTCTTTAGATGCCGTTTTACTTGCAGATTTTGCATGGGTACCAATTCAAAAGGGGAATTTACTTGATTTGTGTACAG
GTAACGCGGTTGTTCCCCTTCTATTAAGTACAAGAACAAAAGGAAATATTACTGGTGTGGAAATTCAAGAACGCTTATAT
GATATGGGAGTAAGAAGTGTTCAATACAATGGGTTGGAAGAAAGAATTCACCTCATACATGGAGATTTGAAAGATATGCC
AGAGAAACTTGGGCGTCATCAATATGATGTTGTTACATGTAATCCACCATATTTTCAAACACCTCAAACTTCAGAGAAAA
ATATGAATGAACATTTAGCGATAGCTCGTCATGAAATTATGTGTACATTAGAAGATGTTGTATCTGCAAGTAGTCAGTTA
GTAAAACAAGGTGGGAAAGTAGCGTTTGTTCATCGTCCAGGGCGATTACTAGACATTGTCACATTAATGCGTAAATATAA
AATTGAACCAAAGCGTGTGCAATTTGTTTATCCTAAGGTTGGAAAAGAAGCAAATACATTGTTAATTGAAGGAATTAAGG
ATGGAAATGCAGATTTGAAAATTTTACCGCCTCTCGTTGTATATGAGAACAATAACGAATATACAAAGGAGCTGCGTTCA
ATTTTATATGGAGAAGAATAA

Upstream 100 bases:

>100_bases
TTCTTAAATAAAAAGTGAAATTACCTTTCCAATTATAATTGGAAAGGTAATTTTTTATACATGAAATAGGGTAGGTTAAG
GGTAAGAAAAGGAGCAGTAT

Downstream 100 bases:

>100_bases
GCACTTTTTTTATGTGGTAGAGTGCTCTGATGGAAGTTATTATGCTGGATATACAAACCATATAGAAAAGAGAATTCAGA
CTCATAATAGCGGCAAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MNLYEDERLDYLLAQDMKIIQSPSVFNFSLDAVLLADFAWVPIQKGNLLDLCTGNAVVPLLLSTRTKGNITGVEIQERLY
DMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQTPQTSEKNMNEHLAIARHEIMCTLEDVVSASSQL
VKQGGKVAFVHRPGRLLDIVTLMRKYKIEPKRVQFVYPKVGKEANTLLIEGIKDGNADLKILPPLVVYENNNEYTKELRS
ILYGEE

Sequences:

>Translated_246_residues
MNLYEDERLDYLLAQDMKIIQSPSVFNFSLDAVLLADFAWVPIQKGNLLDLCTGNAVVPLLLSTRTKGNITGVEIQERLY
DMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQTPQTSEKNMNEHLAIARHEIMCTLEDVVSASSQL
VKQGGKVAFVHRPGRLLDIVTLMRKYKIEPKRVQFVYPKVGKEANTLLIEGIKDGNADLKILPPLVVYENNNEYTKELRS
ILYGEE
>Mature_246_residues
MNLYEDERLDYLLAQDMKIIQSPSVFNFSLDAVLLADFAWVPIQKGNLLDLCTGNAVVPLLLSTRTKGNITGVEIQERLY
DMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQTPQTSEKNMNEHLAIARHEIMCTLEDVVSASSQL
VKQGGKVAFVHRPGRLLDIVTLMRKYKIEPKRVQFVYPKVGKEANTLLIEGIKDGNADLKILPPLVVYENNNEYTKELRS
ILYGEE

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 28003; Mature: 28003

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYEDERLDYLLAQDMKIIQSPSVFNFSLDAVLLADFAWVPIQKGNLLDLCTGNAVVPL
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHEEEEEECCCCEEEEECCCCEEEE
LLSTRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTC
EEECCCCCCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHCCHHHHHHHHCCCEEEEEEC
NPPYFQTPQTSEKNMNEHLAIARHEIMCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIV
CCCCCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH
TLMRKYKIEPKRVQFVYPKVGKEANTLLIEGIKDGNADLKILPPLVVYENNNEYTKELRS
HHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEECEEEEEECCCHHHHHHHH
ILYGEE
HHCCCC
>Mature Secondary Structure
MNLYEDERLDYLLAQDMKIIQSPSVFNFSLDAVLLADFAWVPIQKGNLLDLCTGNAVVPL
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHEEEEEECCCCEEEEECCCCEEEE
LLSTRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTC
EEECCCCCCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHCCHHHHHHHHCCCEEEEEEC
NPPYFQTPQTSEKNMNEHLAIARHEIMCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIV
CCCCCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH
TLMRKYKIEPKRVQFVYPKVGKEANTLLIEGIKDGNADLKILPPLVVYENNNEYTKELRS
HHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEECEEEEEECCCHHHHHHHH
ILYGEE
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]