Click here to switch to the map view.

The map label for this gene is ykuC [H]

Identifier: 218232696

GI number: 218232696

Start: 440094

End: 441326

Strand: Direct

Name: ykuC [H]

Synonym: BCB4264_A0456

Alternate gene names: 218232696

Gene position: 440094-441326 (Clockwise)

Preceding gene: 218233998

Following gene: 218233192

Centisome position: 8.12

GC content: 35.77

Gene sequence:

>1233_bases
ATGAACGCTTTATTTAAAAACCGAGCATTTATGCTCGTTATGGCGTCTGATATTTTACAACAATTTGCAATTTGGATCAG
AAATATGGCTCTTTTATATTTCATAATGGAGCGAACGAATAATGATCCGGTTTCTGTTTCTTTGTTATCAGTTATGGAAT
ATGCACCTATTTTTATTTTCTCGTTTATCGGTGGTGCGCTAGCTGATCGCTGGAATCCGAAAAGAACAATGGTCGCTGGA
GATGTGTTGAGTGTACTGTCTATTATAGGAATTGTCCTGTTGTTAAAGCTGGATTATTGGCAGGCTATATTTTTTGCAAC
ACTCATTTCCGCGATTGTAGGTCAGTTTTCTCAGCCCTCATCTTCGCGTATATTTAAGCGCTATGTAAAAGAAGAACAGG
TAGCAAATGCGATTGCATTTAACCAAACATTACAGTCATTATTTCTAATTTTTGGACCAGTGGTAGGATCGCTTGTGTAT
ACACAACTTGGTTTATTTACGTCACTATATAGCTTAATCATTTTATTTTTGTTATCTGCTATCGCCCTTTCATTTTTACC
AAAATGGGTTGAAAAAGAGCAAGTGGCGAGAGATTCATTAAAAAATGATATAAAAGAAGGTTGGAAGTATGTTCTTCATA
CGAAAAATTTACGTATGATTACGATCACTTTCACCATTATAGGCTTAGCTGTTGGATTAACAACTCCATTAGAGGTGTTT
CTTGTAATAGAACGCCTTGGAATGGAAAAGGAAGCAGTTCAATATTTAGCTGCAGCTGATGGAATAGGTATGTTAATTGG
TGGTATTGTTGCTGCAATTTTCGCTTCAAAAGTGAATCCGAAAAAAATGTTTGTATTCGGTATGGGCATATTAGCAATGT
CATTTTTAGTAGAAGGGCTATCTACATCATTTTGGATTACTAGTTTCATGAGGTTTGGAACAGGTATTTGTTTAGCTTGT
GTTAATATTGTTGTCGGTACGCTTATGATTCAACTTGTACCAGAAAATATGGTTGGAAGAGTAAATGGGACGATTTTACC
ACTGTTTATGGGGGCAATGCTAATTGGAACTTCACTAGCTGGAGGATTAAAGGAACTAACTTCACTAGTTACTGTGTTTT
GTATAGCAATGGCACTTATTTTATTAGCGATAGGGCCAGTTCTACGTATGCAAATGAAAAAAGAAGATGTTGCTAATAAA
GAGGCACTAACAAATTCGTTAGCTTCGAAATAA

Upstream 100 bases:

>100_bases
AGATGTATTGTTAAAAGGAATGGCAGCTGAATAATAGGTCAGTTGCTTTTCTTACAAAATAAATTAGACTGAACGGTCGG
TTTGTGAAAGGGGAATGAAA

Downstream 100 bases:

>100_bases
CTATTGTAAGGGAGCAATATTGCTCCCTTTTTCTTTGAGGAACTTTTGACAACTATATGAGCCAATTATATACTGATGTT
GTAAAAACGATTTTACAGGT

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MNALFKNRAFMLVMASDILQQFAIWIRNMALLYFIMERTNNDPVSVSLLSVMEYAPIFIFSFIGGALADRWNPKRTMVAG
DVLSVLSIIGIVLLLKLDYWQAIFFATLISAIVGQFSQPSSSRIFKRYVKEEQVANAIAFNQTLQSLFLIFGPVVGSLVY
TQLGLFTSLYSLIILFLLSAIALSFLPKWVEKEQVARDSLKNDIKEGWKYVLHTKNLRMITITFTIIGLAVGLTTPLEVF
LVIERLGMEKEAVQYLAAADGIGMLIGGIVAAIFASKVNPKKMFVFGMGILAMSFLVEGLSTSFWITSFMRFGTGICLAC
VNIVVGTLMIQLVPENMVGRVNGTILPLFMGAMLIGTSLAGGLKELTSLVTVFCIAMALILLAIGPVLRMQMKKEDVANK
EALTNSLASK

Sequences:

>Translated_410_residues
MNALFKNRAFMLVMASDILQQFAIWIRNMALLYFIMERTNNDPVSVSLLSVMEYAPIFIFSFIGGALADRWNPKRTMVAG
DVLSVLSIIGIVLLLKLDYWQAIFFATLISAIVGQFSQPSSSRIFKRYVKEEQVANAIAFNQTLQSLFLIFGPVVGSLVY
TQLGLFTSLYSLIILFLLSAIALSFLPKWVEKEQVARDSLKNDIKEGWKYVLHTKNLRMITITFTIIGLAVGLTTPLEVF
LVIERLGMEKEAVQYLAAADGIGMLIGGIVAAIFASKVNPKKMFVFGMGILAMSFLVEGLSTSFWITSFMRFGTGICLAC
VNIVVGTLMIQLVPENMVGRVNGTILPLFMGAMLIGTSLAGGLKELTSLVTVFCIAMALILLAIGPVLRMQMKKEDVANK
EALTNSLASK
>Mature_410_residues
MNALFKNRAFMLVMASDILQQFAIWIRNMALLYFIMERTNNDPVSVSLLSVMEYAPIFIFSFIGGALADRWNPKRTMVAG
DVLSVLSIIGIVLLLKLDYWQAIFFATLISAIVGQFSQPSSSRIFKRYVKEEQVANAIAFNQTLQSLFLIFGPVVGSLVY
TQLGLFTSLYSLIILFLLSAIALSFLPKWVEKEQVARDSLKNDIKEGWKYVLHTKNLRMITITFTIIGLAVGLTTPLEVF
LVIERLGMEKEAVQYLAAADGIGMLIGGIVAAIFASKVNPKKMFVFGMGILAMSFLVEGLSTSFWITSFMRFGTGICLAC
VNIVVGTLMIQLVPENMVGRVNGTILPLFMGAMLIGTSLAGGLKELTSLVTVFCIAMALILLAIGPVLRMQMKKEDVANK
EALTNSLASK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004751
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45127; Mature: 45127

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]