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The map label for this gene is zntR [C]

Identifier: 218232517

GI number: 218232517

Start: 1688421

End: 1688801

Strand: Reverse

Name: zntR [C]

Synonym: BCB4264_A1781

Alternate gene names: 218232517

Gene position: 1688801-1688421 (Counterclockwise)

Preceding gene: 218235695

Following gene: 218235691

Centisome position: 31.16

GC content: 30.45

Gene sequence:

>381_bases
ATGTATTATACAATTGGGCAAGTCGCCAAAATGCAACATTTAACTATTTCTCAAATACGTTATTACGATAAACAAGGACT
GTTTCCTTTTCTGCAAAGAAACGAAAAAGGAGATCGAGTTTTTGATGAAGAAGCACTGAAATATTTAGAAATGATTTTGT
GTTTAAAAAACACCAGTATGCCAATTCAAAAAATAAAACAATTTATCGACTGGTCTATGGAAGGAGAATCTACCATCCTT
CAAAGGTTAGAATTAATGAAACAACAGGAGACCAATGTCTTACAGCTCATGCAAGACACCGAAAAAAACTTAAAAAAGAT
ACAACAAAAAATTGCTAAATATGAGAATGAAATAACTTCAGCAAATGCTATTAAAAAATAA

Upstream 100 bases:

>100_bases
GCTAAAATTATTATTAAATATGCATTAAGTGAAACAAACTATAATGGTAAAATACTTAACAAAGATGGCATTATACCTTG
GTAATAAAAGGATGAATGAT

Downstream 100 bases:

>100_bases
AAAAATCACCTTCTACATATTGTAGAAGGTGATTTTTATTTTATGATGCTTGCTTTCCTTTATCTGCATCATCTACATAC
CAGATGAATTTGCCTGTATA

Product: transcriptional regulator, MerR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MYYTIGQVAKMQHLTISQIRYYDKQGLFPFLQRNEKGDRVFDEEALKYLEMILCLKNTSMPIQKIKQFIDWSMEGESTIL
QRLELMKQQETNVLQLMQDTEKNLKKIQQKIAKYENEITSANAIKK

Sequences:

>Translated_126_residues
MYYTIGQVAKMQHLTISQIRYYDKQGLFPFLQRNEKGDRVFDEEALKYLEMILCLKNTSMPIQKIKQFIDWSMEGESTIL
QRLELMKQQETNVLQLMQDTEKNLKKIQQKIAKYENEITSANAIKK
>Mature_126_residues
MYYTIGQVAKMQHLTISQIRYYDKQGLFPFLQRNEKGDRVFDEEALKYLEMILCLKNTSMPIQKIKQFIDWSMEGESTIL
QRLELMKQQETNVLQLMQDTEKNLKKIQQKIAKYENEITSANAIKK

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 15000; Mature: 15000

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYTIGQVAKMQHLTISQIRYYDKQGLFPFLQRNEKGDRVFDEEALKYLEMILCLKNTSM
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PIQKIKQFIDWSMEGESTILQRLELMKQQETNVLQLMQDTEKNLKKIQQKIAKYENEITS
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANAIKK
HHCCCC
>Mature Secondary Structure
MYYTIGQVAKMQHLTISQIRYYDKQGLFPFLQRNEKGDRVFDEEALKYLEMILCLKNTSM
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PIQKIKQFIDWSMEGESTILQRLELMKQQETNVLQLMQDTEKNLKKIQQKIAKYENEITS
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANAIKK
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]