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The map label for this gene is ykuK [H]

Identifier: 218232516

GI number: 218232516

Start: 4002753

End: 4003271

Strand: Reverse

Name: ykuK [H]

Synonym: BCB4264_A4088

Alternate gene names: 218232516

Gene position: 4003271-4002753 (Counterclockwise)

Preceding gene: 218232202

Following gene: 218231076

Centisome position: 73.87

GC content: 36.8

Gene sequence:

>519_bases
GTGGACGGTGCACATAAATTTTACAATGTTTCAGAGAGACATTTAAATTTTGATATGGTCTTTAACCGTATATGTAGTTT
CATTGAAAAGGATCCGCGAAATTTGTATCGATTATCCATTGGGACAGACTCGCAAGCGCATCAAAAGGATACGAGGTTTA
TTACAGCAATCCATATTCATCGTGTTGGAAAAGGTGCCTGGGGTTGTTTACACCATAGATCAGTAAAAGATAAGCCAGCG
ACCTTACGTGAGAAAATATATTTAGAAACGCAGTTTAGTCAAGAAATCGCATGTCTATTTACGCCTACTCATATACAAAC
AATATGGGAGTTATTGCATCCTTATGCTCAAGATGGGGCTGGATTCATAATGGAAATTCATTTAGACATTGGGAATGATG
GCTTAACAAAAGAATTTATTTTAGATATGACAGAAAAAATTCGAGCGATGGGATTAACTGCAAAAATTAAGCCGGATGCT
TATGCGGCGTTTAGCTATGCAAATCGATATACGAAATGA

Upstream 100 bases:

>100_bases
GAAATATTGAAACGAATAAAGGATAGGAAGTTATAATTTTAGTTTTTGTCCCATACAATGAGAATACGAAAAGTCTGTCT
AATTGAAAGGACGTGACTCT

Downstream 100 bases:

>100_bases
TTTTTTTGTATGTGTACGATTGTTACATATCTTTTAATAAAAACTGAATATTACATCTATTAAATAGGTTGAATTTTTTA
TATAATAAGAGTAACGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MDGAHKFYNVSERHLNFDMVFNRICSFIEKDPRNLYRLSIGTDSQAHQKDTRFITAIHIHRVGKGAWGCLHHRSVKDKPA
TLREKIYLETQFSQEIACLFTPTHIQTIWELLHPYAQDGAGFIMEIHLDIGNDGLTKEFILDMTEKIRAMGLTAKIKPDA
YAAFSYANRYTK

Sequences:

>Translated_172_residues
MDGAHKFYNVSERHLNFDMVFNRICSFIEKDPRNLYRLSIGTDSQAHQKDTRFITAIHIHRVGKGAWGCLHHRSVKDKPA
TLREKIYLETQFSQEIACLFTPTHIQTIWELLHPYAQDGAGFIMEIHLDIGNDGLTKEFILDMTEKIRAMGLTAKIKPDA
YAAFSYANRYTK
>Mature_172_residues
MDGAHKFYNVSERHLNFDMVFNRICSFIEKDPRNLYRLSIGTDSQAHQKDTRFITAIHIHRVGKGAWGCLHHRSVKDKPA
TLREKIYLETQFSQEIACLFTPTHIQTIWELLHPYAQDGAGFIMEIHLDIGNDGLTKEFILDMTEKIRAMGLTAKIKPDA
YAAFSYANRYTK

Specific function: Unknown

COG id: COG1978

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007405 [H]

Pfam domain/function: PF04308 DUF458 [H]

EC number: NA

Molecular weight: Translated: 19875; Mature: 19875

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGAHKFYNVSERHLNFDMVFNRICSFIEKDPRNLYRLSIGTDSQAHQKDTRFITAIHIH
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHEEEEEEEE
RVGKGAWGCLHHRSVKDKPATLREKIYLETQFSQEIACLFTPTHIQTIWELLHPYAQDGA
ECCCCHHHHHHCCCCCCCCHHHHHHEEEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCC
GFIMEIHLDIGNDGLTKEFILDMTEKIRAMGLTAKIKPDAYAAFSYANRYTK
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDGAHKFYNVSERHLNFDMVFNRICSFIEKDPRNLYRLSIGTDSQAHQKDTRFITAIHIH
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHEEEEEEEE
RVGKGAWGCLHHRSVKDKPATLREKIYLETQFSQEIACLFTPTHIQTIWELLHPYAQDGA
ECCCCHHHHHHCCCCCCCCHHHHHHEEEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCC
GFIMEIHLDIGNDGLTKEFILDMTEKIRAMGLTAKIKPDAYAAFSYANRYTK
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]