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The map label for this gene is yphF [H]

Identifier: 218232274

GI number: 218232274

Start: 1493300

End: 1494010

Strand: Direct

Name: yphF [H]

Synonym: BCB4264_A1564

Alternate gene names: 218232274

Gene position: 1493300-1494010 (Clockwise)

Preceding gene: 218232213

Following gene: 218231665

Centisome position: 27.56

GC content: 34.46

Gene sequence:

>711_bases
GTGAAAAAATTCCATATTATTTTAATATTTTGTTGTATGAGCCTTTTAACGGGGTGTCTGTATCCGAAAGAAAATATGAA
GCAAAATGCGGTTCCTTATGAAGATCAGCTACAGGTTGTTCAAAAAGCTGTTGTGACATTTAAGGAGCAAAATGATGGGA
TATTGCCAATTAAGACGAGGGATATGAGTACACCTATTTATCAAAAGTATCCAATCGATTTTCAACAGATTGCCCCGCGT
TACATACAAGAAGCGCCAGGGAATGCGTATGAAAGTGGAGGAGTATATCAATACGTATTAATAGACGTTGAAACAAATCC
GACAGTAAAGTTAATTGATGTTAGGATGGCTGAACAAATTCAGGAACTATCTTTAAAGCTTAGGATGTATCGTGATGAAC
ATCAATATCCACCTTTTAAAAAAGTAATTTCAGATGGTGTATATGAATTGGATTTCAAAAAACTAGGATATAAAGATGTG
CCACAAGTGACAAGTCCATATTCTGGTAAAGGACTTCCTTTTGTAATTAATGAAAAAGGAGAAGTTTTTGTTGATTATAG
AATCGACTTATATGACGCTTTGAAAAAAAATGAAGGGCAGTTTACAGAGGGAGAAGATATTCGAAATATACTTTCGAAAG
GTTCCCCATTTGTACCAGCTTATTCTTTACCGTACACAGTAAAGGACGGAGAACCAATTTTTTTAAAATGA

Upstream 100 bases:

>100_bases
TTTTCTTGTTGTATTTAGTGGACCTGTACAGCAGTAAATGGAATGGTCTCGAAAATACTACATACGGAGCAAATTAGATT
AGTATGAAAAGGTGATGCTA

Downstream 100 bases:

>100_bases
TAAGTCATGAACCTTTCTTTTAGTGAATAAGTTCTAGAAGAAAGGTTTTTTATGTTATACAACTTACGATGCAAACAAAA
GATATTTTTTAATAGTCATA

Product: YphF

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKKFHIILIFCCMSLLTGCLYPKENMKQNAVPYEDQLQVVQKAVVTFKEQNDGILPIKTRDMSTPIYQKYPIDFQQIAPR
YIQEAPGNAYESGGVYQYVLIDVETNPTVKLIDVRMAEQIQELSLKLRMYRDEHQYPPFKKVISDGVYELDFKKLGYKDV
PQVTSPYSGKGLPFVINEKGEVFVDYRIDLYDALKKNEGQFTEGEDIRNILSKGSPFVPAYSLPYTVKDGEPIFLK

Sequences:

>Translated_236_residues
MKKFHIILIFCCMSLLTGCLYPKENMKQNAVPYEDQLQVVQKAVVTFKEQNDGILPIKTRDMSTPIYQKYPIDFQQIAPR
YIQEAPGNAYESGGVYQYVLIDVETNPTVKLIDVRMAEQIQELSLKLRMYRDEHQYPPFKKVISDGVYELDFKKLGYKDV
PQVTSPYSGKGLPFVINEKGEVFVDYRIDLYDALKKNEGQFTEGEDIRNILSKGSPFVPAYSLPYTVKDGEPIFLK
>Mature_236_residues
MKKFHIILIFCCMSLLTGCLYPKENMKQNAVPYEDQLQVVQKAVVTFKEQNDGILPIKTRDMSTPIYQKYPIDFQQIAPR
YIQEAPGNAYESGGVYQYVLIDVETNPTVKLIDVRMAEQIQELSLKLRMYRDEHQYPPFKKVISDGVYELDFKKLGYKDV
PQVTSPYSGKGLPFVINEKGEVFVDYRIDLYDALKKNEGQFTEGEDIRNILSKGSPFVPAYSLPYTVKDGEPIFLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27192; Mature: 27192

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFHIILIFCCMSLLTGCLYPKENMKQNAVPYEDQLQVVQKAVVTFKEQNDGILPIKTR
CCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC
DMSTPIYQKYPIDFQQIAPRYIQEAPGNAYESGGVYQYVLIDVETNPTVKLIDVRMAEQI
CCCCCCCEECCCCHHHHCHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHHHHH
QELSLKLRMYRDEHQYPPFKKVISDGVYELDFKKLGYKDVPQVTSPYSGKGLPFVINEKG
HHHHHHHHHHHCCCCCCCHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCCCCCEEECCCC
EVFVDYRIDLYDALKKNEGQFTEGEDIRNILSKGSPFVPAYSLPYTVKDGEPIFLK
CEEEEEEECHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEC
>Mature Secondary Structure
MKKFHIILIFCCMSLLTGCLYPKENMKQNAVPYEDQLQVVQKAVVTFKEQNDGILPIKTR
CCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC
DMSTPIYQKYPIDFQQIAPRYIQEAPGNAYESGGVYQYVLIDVETNPTVKLIDVRMAEQI
CCCCCCCEECCCCHHHHCHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHHHHH
QELSLKLRMYRDEHQYPPFKKVISDGVYELDFKKLGYKDVPQVTSPYSGKGLPFVINEKG
HHHHHHHHHHHCCCCCCCHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCCCCCEEECCCC
EVFVDYRIDLYDALKKNEGQFTEGEDIRNILSKGSPFVPAYSLPYTVKDGEPIFLK
CEEEEEEECHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 1729246 [H]