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The map label for this gene is ypeP [H]

Identifier: 218232188

GI number: 218232188

Start: 1590625

End: 1591284

Strand: Direct

Name: ypeP [H]

Synonym: BCB4264_A1663

Alternate gene names: 218232188

Gene position: 1590625-1591284 (Clockwise)

Preceding gene: 218236118

Following gene: 218231592

Centisome position: 29.35

GC content: 35.3

Gene sequence:

>660_bases
ATGAAATATAAAATTCATTGGTTGTATAAAACGAAGCGCGGATTGCAGACGGAATTAACGACAGAGTATATGAACATAGA
AGAAGTACTTCAATTTGCAGAGGATTTTGAGAAAACAGGAAGAGTAAAAGAATTTTCATTTTATGATGAAATGGACGCGG
AATGGTCATTAAAAGAGATGAAAAAGTTAAGTAAGCAAGTAGAGGAAGAGCCCCAAGAAATAATCGTTTATTTTGATGGG
GGGTATGATGTGCAGACGAAAGAGGCCGGCGTTGGTATATGTGTGTATTATAAAAAAGGAAACACAAACTACCGTATTCG
CCGCAATGCATATATAGAAGGTATATATGATAATAATGAAGCGGAATATGCATCATTATTATACGGTATGAATATACTCG
AGGAATTAGGGATTAAGTATGAAGCAGTTACACTTCGCGGAGATTCTCAAGTTGTACTGCAGCAATTAGCCGGAGAATGG
CCTTGTTATGATGAGCATTTAAACCATTATTTAGACCAAATTGAGCAAAAGGCGAAGCAAATGAAGTTAAAACTTATATG
TGAGCCGATATCTAGAAAACAAAATAAAGAAGCACATCAATTAGCTACGCAAGCATTGGAAGGAACAGTTATTGATAGTC
ATAAAGAAATAACTGAATAG

Upstream 100 bases:

>100_bases
TATTGAATATAATACTGTGACTCTTGATAAAATATAATAAAATAAATTGAGGCTTCAATTAGCCGGATAAATAAGAAGTC
TTACATAAGGGGAATGAAGT

Downstream 100 bases:

>100_bases
AGAGGTGCAAAGGTGGATAAAAAGCAACTCATTACAGAGGTAAATGACTTATTAGAAACGTATTGTGAAGGCTGTTTTTT
GCGAGAACATAATCGAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKYKIHWLYKTKRGLQTELTTEYMNIEEVLQFAEDFEKTGRVKEFSFYDEMDAEWSLKEMKKLSKQVEEEPQEIIVYFDG
GYDVQTKEAGVGICVYYKKGNTNYRIRRNAYIEGIYDNNEAEYASLLYGMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLICEPISRKQNKEAHQLATQALEGTVIDSHKEITE

Sequences:

>Translated_219_residues
MKYKIHWLYKTKRGLQTELTTEYMNIEEVLQFAEDFEKTGRVKEFSFYDEMDAEWSLKEMKKLSKQVEEEPQEIIVYFDG
GYDVQTKEAGVGICVYYKKGNTNYRIRRNAYIEGIYDNNEAEYASLLYGMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLICEPISRKQNKEAHQLATQALEGTVIDSHKEITE
>Mature_219_residues
MKYKIHWLYKTKRGLQTELTTEYMNIEEVLQFAEDFEKTGRVKEFSFYDEMDAEWSLKEMKKLSKQVEEEPQEIIVYFDG
GYDVQTKEAGVGICVYYKKGNTNYRIRRNAYIEGIYDNNEAEYASLLYGMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLICEPISRKQNKEAHQLATQALEGTVIDSHKEITE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RNase H domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002156 [H]

Pfam domain/function: PF00075 RnaseH [H]

EC number: 3.1.26.4

Molecular weight: Translated: 25752; Mature: 25752

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50879 RNASE_H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKIHWLYKTKRGLQTELTTEYMNIEEVLQFAEDFEKTGRVKEFSFYDEMDAEWSLKEM
CCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCHHHH
KKLSKQVEEEPQEIIVYFDGGYDVQTKEAGVGICVYYKKGNTNYRIRRNAYIEGIYDNNE
HHHHHHHHCCCCEEEEEECCCEEEEECCCCCEEEEEEEECCCCEEEEECEEEEEEECCCH
AEYASLLYGMNILEELGIKYEAVTLRGDSQVVLQQLAGEWPCYDEHLNHYLDQIEQKAKQ
HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MKLKLICEPISRKQNKEAHQLATQALEGTVIDSHKEITE
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCHHCCC
>Mature Secondary Structure
MKYKIHWLYKTKRGLQTELTTEYMNIEEVLQFAEDFEKTGRVKEFSFYDEMDAEWSLKEM
CCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCHHHH
KKLSKQVEEEPQEIIVYFDGGYDVQTKEAGVGICVYYKKGNTNYRIRRNAYIEGIYDNNE
HHHHHHHHCCCCEEEEEECCCEEEEECCCCCEEEEEEEECCCCEEEEECEEEEEEECCCH
AEYASLLYGMNILEELGIKYEAVTLRGDSQVVLQQLAGEWPCYDEHLNHYLDQIEQKAKQ
HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MKLKLICEPISRKQNKEAHQLATQALEGTVIDSHKEITE
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]