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The map label for this gene is tsr [C]

Identifier: 218232120

GI number: 218232120

Start: 3274372

End: 3275964

Strand: Reverse

Name: tsr [C]

Synonym: BCB4264_A3394

Alternate gene names: 218232120

Gene position: 3275964-3274372 (Counterclockwise)

Preceding gene: 218232042

Following gene: 218235717

Centisome position: 60.45

GC content: 32.77

Gene sequence:

>1593_bases
ATGTATGAGGATAATTTACTGCCAATTGAGTGGATTGGAATTGTAGAATCTAATTTTTATCACGTTAATATGAACTTTAT
GGAAATAATGTTATCAAAAGATGAAAAAAGAATGAACGAATTAATAAGAGAAATGGATGGGATTCGTAAGGAAAATGATC
ATCTTTTAAAGCAGTTTGAGGCTAAACTTATTTCTACTAAAGAAAAAGAATTATATAACACGTTTCATGAAACATTTAAT
GAATTAAGGACTCAAATGAAGAAAGCACAAGAATTAGGGAAGTCTAATAATGAGGAAGCATATGCATATTATCTAAAAGA
GATTGAACCTAATATGCAAAAATCAATAAAATCAATTCGTGAATTGATTTTATATAATAGTAATAATGCAGAGCTTTTAC
AGAAGGAAAATAATAATAGTGCTCAAAATACAATGATAATGTTTGTTAGTATTTCGATTTTAGCAATTTTAATAATTATA
TTAATTGGATATGTTATTAAATTAACTATCCGAAAACCACTTGCATTACTACAAAATGATATGGAAAAAGTAGCAGCTGG
AGATTTAACAACACGTACTCCTTATAAAGCAAATAATGAATTAGGGCATATTGTTCAGTCTTTTAATAGTATGTTAGATA
ACCTTCAACAATTAATTGCGAATGTTAAGATGACAACACAAGAGGTTATTTTTACTACGGAGGGCGTATTACAAGATACA
AATCGAGCGTCTAGTATTTCAAATGAGGTTGTACAGACTGTTTTAGAAGTAAAAACAAAAATAGAAGGACAGGTAACTAG
TATTCAGGAGAGCTCATCCTCAATGGAAGAAATTACAACCGGGGTGCAAACTGTAGCTGAATCTTCAGCAGTAGTCGCTG
AGGTAGCAGTAACGACTACAGAACGAATAAATATCGGTAGTGAAGTGATAAATCACTCTATTCTTCAAATGAATAGTGTG
CATGATGTTGTCGAGGAAACATCAAAAGTAATAAATAAACTTGTTACACGTACACAACAGATTGATACAGCTCTCGCTGC
AATTACTAATATTGCCGAACAAACGAATCTTCTTGCCTTAAATGCCGCTATTGAAGCGGCACGTGCTGGAGAGAATGGGA
AAGGATTTGCAGTGGTTGCCGCAGAAGTTCGAGACTTGGCTGAGCAATCTAAAGAATCTGCAAAAGAAGTTAATCATTTA
ATAAAATCCATTCAAAAAGATACCCAAGATACAGTTAATGTCATGCAAAAAGGACAACAAAAGGCAGTAGAAGGAAAAGA
AGCTGCTTACAAAGCGAATCAAACCTTCTTGTCTATTATGAGAGATATTGATAAGATTACAGGTCAAATTCAAGAAGTAT
CCGCAGCGACAGAAGAGATGTCTGCTGGTACAGAAGAAGTAAATGCTTCTCTTTCGCTAGTTTCTGAAACTGCAACGGAT
GTGAAAAAGGAGACTCTTCAAACTGTAAATTCAATTCAATCACAGGCCGTATCAATTGAACAAATATCAATCCAATCCAA
CAAAATGAAAGAAAAGGTGGAAGAATTAACGGAATTGGTTTCAAAATTTAATATTACAGAACAAAAAGAATGA

Upstream 100 bases:

>100_bases
AAAACTAAACATATTAATAACTATATCAAGTATTGCATGTATAGTATTATCCCTAATAGGGTTTTGGGGGTTAGAAAGAG
GGAAAAGTACTTCCTCTAAT

Downstream 100 bases:

>100_bases
GTAAATTGTAAAAGATTAGGTACGGCTATCAGCCTAAAAATAATTGATTTTTTACGATTAAAAAGATTTTAGTAATTAAT
TCAATCACAAGTGTAATAAC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MYEDNLLPIEWIGIVESNFYHVNMNFMEIMLSKDEKRMNELIREMDGIRKENDHLLKQFEAKLISTKEKELYNTFHETFN
ELRTQMKKAQELGKSNNEEAYAYYLKEIEPNMQKSIKSIRELILYNSNNAELLQKENNNSAQNTMIMFVSISILAILIII
LIGYVIKLTIRKPLALLQNDMEKVAAGDLTTRTPYKANNELGHIVQSFNSMLDNLQQLIANVKMTTQEVIFTTEGVLQDT
NRASSISNEVVQTVLEVKTKIEGQVTSIQESSSSMEEITTGVQTVAESSAVVAEVAVTTTERINIGSEVINHSILQMNSV
HDVVEETSKVINKLVTRTQQIDTALAAITNIAEQTNLLALNAAIEAARAGENGKGFAVVAAEVRDLAEQSKESAKEVNHL
IKSIQKDTQDTVNVMQKGQQKAVEGKEAAYKANQTFLSIMRDIDKITGQIQEVSAATEEMSAGTEEVNASLSLVSETATD
VKKETLQTVNSIQSQAVSIEQISIQSNKMKEKVEELTELVSKFNITEQKE

Sequences:

>Translated_530_residues
MYEDNLLPIEWIGIVESNFYHVNMNFMEIMLSKDEKRMNELIREMDGIRKENDHLLKQFEAKLISTKEKELYNTFHETFN
ELRTQMKKAQELGKSNNEEAYAYYLKEIEPNMQKSIKSIRELILYNSNNAELLQKENNNSAQNTMIMFVSISILAILIII
LIGYVIKLTIRKPLALLQNDMEKVAAGDLTTRTPYKANNELGHIVQSFNSMLDNLQQLIANVKMTTQEVIFTTEGVLQDT
NRASSISNEVVQTVLEVKTKIEGQVTSIQESSSSMEEITTGVQTVAESSAVVAEVAVTTTERINIGSEVINHSILQMNSV
HDVVEETSKVINKLVTRTQQIDTALAAITNIAEQTNLLALNAAIEAARAGENGKGFAVVAAEVRDLAEQSKESAKEVNHL
IKSIQKDTQDTVNVMQKGQQKAVEGKEAAYKANQTFLSIMRDIDKITGQIQEVSAATEEMSAGTEEVNASLSLVSETATD
VKKETLQTVNSIQSQAVSIEQISIQSNKMKEKVEELTELVSKFNITEQKE
>Mature_530_residues
MYEDNLLPIEWIGIVESNFYHVNMNFMEIMLSKDEKRMNELIREMDGIRKENDHLLKQFEAKLISTKEKELYNTFHETFN
ELRTQMKKAQELGKSNNEEAYAYYLKEIEPNMQKSIKSIRELILYNSNNAELLQKENNNSAQNTMIMFVSISILAILIII
LIGYVIKLTIRKPLALLQNDMEKVAAGDLTTRTPYKANNELGHIVQSFNSMLDNLQQLIANVKMTTQEVIFTTEGVLQDT
NRASSISNEVVQTVLEVKTKIEGQVTSIQESSSSMEEITTGVQTVAESSAVVAEVAVTTTERINIGSEVINHSILQMNSV
HDVVEETSKVINKLVTRTQQIDTALAAITNIAEQTNLLALNAAIEAARAGENGKGFAVVAAEVRDLAEQSKESAKEVNHL
IKSIQKDTQDTVNVMQKGQQKAVEGKEAAYKANQTFLSIMRDIDKITGQIQEVSAATEEMSAGTEEVNASLSLVSETATD
VKKETLQTVNSIQSQAVSIEQISIQSNKMKEKVEELTELVSKFNITEQKE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=407, Percent_Identity=26.5356265356265, Blast_Score=141, Evalue=1e-34,
Organism=Escherichia coli, GI1788194, Length=379, Percent_Identity=27.1767810026385, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1787690, Length=380, Percent_Identity=26.8421052631579, Blast_Score=126, Evalue=4e-30,
Organism=Escherichia coli, GI1788195, Length=309, Percent_Identity=28.1553398058252, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1789453, Length=363, Percent_Identity=25.068870523416, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 59238; Mature: 59238

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEDNLLPIEWIGIVESNFYHVNMNFMEIMLSKDEKRMNELIREMDGIRKENDHLLKQFE
CCCCCCCCEEEEEEEECCEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
AKLISTKEKELYNTFHETFNELRTQMKKAQELGKSNNEEAYAYYLKEIEPNMQKSIKSIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHH
ELILYNSNNAELLQKENNNSAQNTMIMFVSISILAILIIILIGYVIKLTIRKPLALLQND
HHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEKVAAGDLTTRTPYKANNELGHIVQSFNSMLDNLQQLIANVKMTTQEVIFTTEGVLQDT
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NRASSISNEVVQTVLEVKTKIEGQVTSIQESSSSMEEITTGVQTVAESSAVVAEVAVTTT
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERINIGSEVINHSILQMNSVHDVVEETSKVINKLVTRTQQIDTALAAITNIAEQTNLLAL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAAIEAARAGENGKGFAVVAAEVRDLAEQSKESAKEVNHLIKSIQKDTQDTVNVMQKGQQ
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVEGKEAAYKANQTFLSIMRDIDKITGQIQEVSAATEEMSAGTEEVNASLSLVSETATD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VKKETLQTVNSIQSQAVSIEQISIQSNKMKEKVEELTELVSKFNITEQKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYEDNLLPIEWIGIVESNFYHVNMNFMEIMLSKDEKRMNELIREMDGIRKENDHLLKQFE
CCCCCCCCEEEEEEEECCEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
AKLISTKEKELYNTFHETFNELRTQMKKAQELGKSNNEEAYAYYLKEIEPNMQKSIKSIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHH
ELILYNSNNAELLQKENNNSAQNTMIMFVSISILAILIIILIGYVIKLTIRKPLALLQND
HHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEKVAAGDLTTRTPYKANNELGHIVQSFNSMLDNLQQLIANVKMTTQEVIFTTEGVLQDT
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NRASSISNEVVQTVLEVKTKIEGQVTSIQESSSSMEEITTGVQTVAESSAVVAEVAVTTT
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERINIGSEVINHSILQMNSVHDVVEETSKVINKLVTRTQQIDTALAAITNIAEQTNLLAL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAAIEAARAGENGKGFAVVAAEVRDLAEQSKESAKEVNHLIKSIQKDTQDTVNVMQKGQQ
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVEGKEAAYKANQTFLSIMRDIDKITGQIQEVSAATEEMSAGTEEVNASLSLVSETATD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VKKETLQTVNSIQSQAVSIEQISIQSNKMKEKVEELTELVSKFNITEQKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA