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The map label for this gene is ykuI [H]

Identifier: 218232024

GI number: 218232024

Start: 4005196

End: 4006413

Strand: Reverse

Name: ykuI [H]

Synonym: BCB4264_A4094

Alternate gene names: 218232024

Gene position: 4006413-4005196 (Counterclockwise)

Preceding gene: 218235486

Following gene: 218231411

Centisome position: 73.93

GC content: 29.97

Gene sequence:

>1218_bases
TTGATAGATGCATTAGATGTAATGAGTAACTTGGATAAAGTCCTTCCTTATTATCAAGCTATTTTTAGTGCTGATGAGCA
TACTGTAATTGGATATGAAGTAGTAGGACGTATTCAAACAGAAGAGGGCATACAAAGTTTAGCTTCTTTCTTTCACGATG
ATTCGATTCCAAGTGAATTTCAACTGGAAGCGGATAATATTATAGTAGAAAAAGCTTTAAATCGTTATTTAGAAAGCGAT
CAAAAATTATTATTATTTATACATCGGAATGCTAATGTATTAATGAATGATGATGATGAAAGCTTGCTTCAACTTTTATT
GAGGTATGAAGAACAAGGTTTAAATTTAAAACAAATTGTTTTAGAGATTACAGAGCATGAATGTAAAGAAGATATAGAGC
AATTTAATCATTTGCTTATGTATTATCGTACATATGGTATTCAAATTTCGATTAATAAAGTCGGAACGGGTACAAGTAAT
TTAGAGCGTATTAGCGTGTTAGCACCTGATATTTTAAAAGTAGATTTAACGAACTTAAGGCAAACAGCACTTTTACAATC
TTATCAAGATATTTTATATTCTTTATCATTACTTGCTAGAAGAATTGGTGCAACTTTATTATATGAAGAAATAGATGCTT
TTTATCAACTGCAATATGCTTGGAAGAACGGCGGAAGATATTATCAAGGTAATTATTTAAAAGAATGTTTACCTGATTTT
ATTGAAACGAATGTTTTGAAAGAGCGACTAGGTAATGAATGTCATCAGTTTATTCAGCATGAAAAGAAGAAGTTACAAAA
AATTTATAATTTAACAGAGATGTTACGCGATCGCATTGGCGATGTTTTATCAAAACAAAAAAAGAATGAAGATATAAATG
ATTGGTTATTACAATTTAGTCAAAGTGTATCACAGTGTAGTTTTCGTATATTTATTTGTAATGAAGATGGTTTCCAACAA
TCAGGAAATGTTATGAAAAAAGATGGAGAATGGATTGTGATGCCGGATTATTATATGAAGAACTGGAGCTGGCGCCCGTA
TTTTCTCGAGAATATAATGAAAATGCGTTTTGAGAATAAGGCGAGGCTTTCAGATTTATATGCAGATATTGAAACGGGAG
AAATGGTACGAACATTTTCTTTCCCGATTGATGATGACAACTTTTTATTTATAGATTTATCTTATGAATATTTATATGAA
GAAGATGTTTTATTTTAA

Upstream 100 bases:

>100_bases
TTTACCCCTCTAATCCCTTCAGGAAAACTGAAGGGATTTTTTATTATTTTTCCGTAAATATCATGTTATAATTTTTGAAA
AGTAAAGGGAGGGAAGCACG

Downstream 100 bases:

>100_bases
TGCACGAAGAGATTCGTGCATTTTTTGTTTGTTTTTATCATAAATTGGTAATAGTGAAAATGGTGATGAAAATGCTGTCT
ATCGTTGTAAAGATTTTACG

Product: EAL-domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MIDALDVMSNLDKVLPYYQAIFSADEHTVIGYEVVGRIQTEEGIQSLASFFHDDSIPSEFQLEADNIIVEKALNRYLESD
QKLLLFIHRNANVLMNDDDESLLQLLLRYEEQGLNLKQIVLEITEHECKEDIEQFNHLLMYYRTYGIQISINKVGTGTSN
LERISVLAPDILKVDLTNLRQTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGNYLKECLPDF
IETNVLKERLGNECHQFIQHEKKKLQKIYNLTEMLRDRIGDVLSKQKKNEDINDWLLQFSQSVSQCSFRIFICNEDGFQQ
SGNVMKKDGEWIVMPDYYMKNWSWRPYFLENIMKMRFENKARLSDLYADIETGEMVRTFSFPIDDDNFLFIDLSYEYLYE
EDVLF

Sequences:

>Translated_405_residues
MIDALDVMSNLDKVLPYYQAIFSADEHTVIGYEVVGRIQTEEGIQSLASFFHDDSIPSEFQLEADNIIVEKALNRYLESD
QKLLLFIHRNANVLMNDDDESLLQLLLRYEEQGLNLKQIVLEITEHECKEDIEQFNHLLMYYRTYGIQISINKVGTGTSN
LERISVLAPDILKVDLTNLRQTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGNYLKECLPDF
IETNVLKERLGNECHQFIQHEKKKLQKIYNLTEMLRDRIGDVLSKQKKNEDINDWLLQFSQSVSQCSFRIFICNEDGFQQ
SGNVMKKDGEWIVMPDYYMKNWSWRPYFLENIMKMRFENKARLSDLYADIETGEMVRTFSFPIDDDNFLFIDLSYEYLYE
EDVLF
>Mature_405_residues
MIDALDVMSNLDKVLPYYQAIFSADEHTVIGYEVVGRIQTEEGIQSLASFFHDDSIPSEFQLEADNIIVEKALNRYLESD
QKLLLFIHRNANVLMNDDDESLLQLLLRYEEQGLNLKQIVLEITEHECKEDIEQFNHLLMYYRTYGIQISINKVGTGTSN
LERISVLAPDILKVDLTNLRQTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGNYLKECLPDF
IETNVLKERLGNECHQFIQHEKKKLQKIYNLTEMLRDRIGDVLSKQKKNEDINDWLLQFSQSVSQCSFRIFICNEDGFQQ
SGNVMKKDGEWIVMPDYYMKNWSWRPYFLENIMKMRFENKARLSDLYADIETGEMVRTFSFPIDDDNFLFIDLSYEYLYE
EDVLF

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1790496, Length=229, Percent_Identity=25.3275109170306, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633
- InterPro:   IPR018842 [H]

Pfam domain/function: PF00563 EAL; PF10388 YkuI_C [H]

EC number: NA

Molecular weight: Translated: 47798; Mature: 47798

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDALDVMSNLDKVLPYYQAIFSADEHTVIGYEVVGRIQTEEGIQSLASFFHDDSIPSEF
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
QLEADNIIVEKALNRYLESDQKLLLFIHRNANVLMNDDDESLLQLLLRYEEQGLNLKQIV
EECHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCHHHHH
LEITEHECKEDIEQFNHLLMYYRTYGIQISINKVGTGTSNLERISVLAPDILKVDLTNLR
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHH
QTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGNYLKECLPDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
IETNVLKERLGNECHQFIQHEKKKLQKIYNLTEMLRDRIGDVLSKQKKNEDINDWLLQFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QSVSQCSFRIFICNEDGFQQSGNVMKKDGEWIVMPDYYMKNWSWRPYFLENIMKMRFENK
HHHHHCEEEEEEECCCCCCCCCCCEECCCCEEEECCHHHCCCCCCHHHHHHHHHHHHCCH
ARLSDLYADIETGEMVRTFSFPIDDDNFLFIDLSYEYLYEEDVLF
HHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHCCCCC
>Mature Secondary Structure
MIDALDVMSNLDKVLPYYQAIFSADEHTVIGYEVVGRIQTEEGIQSLASFFHDDSIPSEF
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
QLEADNIIVEKALNRYLESDQKLLLFIHRNANVLMNDDDESLLQLLLRYEEQGLNLKQIV
EECHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCHHHHH
LEITEHECKEDIEQFNHLLMYYRTYGIQISINKVGTGTSNLERISVLAPDILKVDLTNLR
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHH
QTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGNYLKECLPDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
IETNVLKERLGNECHQFIQHEKKKLQKIYNLTEMLRDRIGDVLSKQKKNEDINDWLLQFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QSVSQCSFRIFICNEDGFQQSGNVMKKDGEWIVMPDYYMKNWSWRPYFLENIMKMRFENK
HHHHHCEEEEEEECCCCCCCCCCCEECCCCEEEECCHHHCCCCCCHHHHHHHHHHHHCCH
ARLSDLYADIETGEMVRTFSFPIDDDNFLFIDLSYEYLYEEDVLF
HHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]