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The map label for this gene is yxjL [H]

Identifier: 218231951

GI number: 218231951

Start: 1706231

End: 1706920

Strand: Direct

Name: yxjL [H]

Synonym: BCB4264_A1802

Alternate gene names: 218231951

Gene position: 1706231-1706920 (Clockwise)

Preceding gene: 218232667

Following gene: 218232592

Centisome position: 31.49

GC content: 33.19

Gene sequence:

>690_bases
ATGGGAAGAAAGGATGTGAATGTTAGTAGGGGAAGGGCCATACTAACAAACATGAAAATTAAAATATTAATAGCGGATGA
TAACTCTTTTATTAGAGAAGGCATGAAAATTATTTTAAATACATACGAAGAGTTCGAAGTGGTAGATACTGTAAATGATG
GGGAAGAAGCTGTAGCATATTGTAAAAAGCATGAAGTTGATATTGCTCTTTTAGATGTTCGTATGCCAAATATGAACGGT
GTAGAGGCGACGAAATTCATTTGTGAAGAGACGAAAACAAAACCGCTTATTTTAACGACGTTTGATGATGATGAGTATAT
TTTGGATGCAGTAAAAAACGGAGCGAAAGGTTATTTATTAAAAAATAACGATCCGGAGCGTATTCGTGATGCGATAAAAG
GAGTATATAACGGTCAAACTGTTATGCAAGATGTTGTCCTCGATAAAATTAAGTCTAATTTAATGGAAAGTAAAGAGGAA
GAATGTAAAATTGATAAGAGTCTTTTCACAGAAAGGGAGCTTAGTATTATCGCATTAATTGCAAAAGGTTTCTCAAATAA
AGAAATTTCGAAACAGCTTTTTATATCTGAGGGAACAATTGCAAATTATATTACGTCAGTTTTAGGGAAAACTGGACTTG
AACATCGCACACAAATTGCGATTTATTACTTAACAGGGAAAGTAGATTAA

Upstream 100 bases:

>100_bases
TTGTAAAAAAAGAATAATATATTTTTTGTAGGAGAGCTAGATGAAAAAAGGTGTGAAAAAATGGTAAAGAGAAGTATATA
ATGAGCAAGTAGGAAATGTT

Downstream 100 bases:

>100_bases
TGATATGGAGTTTTGGTTAACTGTAAGTAAATTAATTGTCTTTTTATATATTGTGTTTAGTTATATTTACGCAAATGTAG
CAAATTTACCATGGGTTATA

Product: DNA-binding response regulator, LuxR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MGRKDVNVSRGRAILTNMKIKILIADDNSFIREGMKIILNTYEEFEVVDTVNDGEEAVAYCKKHEVDIALLDVRMPNMNG
VEATKFICEETKTKPLILTTFDDDEYILDAVKNGAKGYLLKNNDPERIRDAIKGVYNGQTVMQDVVLDKIKSNLMESKEE
ECKIDKSLFTERELSIIALIAKGFSNKEISKQLFISEGTIANYITSVLGKTGLEHRTQIAIYYLTGKVD

Sequences:

>Translated_229_residues
MGRKDVNVSRGRAILTNMKIKILIADDNSFIREGMKIILNTYEEFEVVDTVNDGEEAVAYCKKHEVDIALLDVRMPNMNG
VEATKFICEETKTKPLILTTFDDDEYILDAVKNGAKGYLLKNNDPERIRDAIKGVYNGQTVMQDVVLDKIKSNLMESKEE
ECKIDKSLFTERELSIIALIAKGFSNKEISKQLFISEGTIANYITSVLGKTGLEHRTQIAIYYLTGKVD
>Mature_228_residues
GRKDVNVSRGRAILTNMKIKILIADDNSFIREGMKIILNTYEEFEVVDTVNDGEEAVAYCKKHEVDIALLDVRMPNMNGV
EATKFICEETKTKPLILTTFDDDEYILDAVKNGAKGYLLKNNDPERIRDAIKGVYNGQTVMQDVVLDKIKSNLMESKEEE
CKIDKSLFTERELSIIALIAKGFSNKEISKQLFISEGTIANYITSVLGKTGLEHRTQIAIYYLTGKVD

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788222, Length=185, Percent_Identity=32.972972972973, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1788521, Length=208, Percent_Identity=31.25, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1787473, Length=202, Percent_Identity=29.2079207920792, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786747, Length=197, Percent_Identity=27.4111675126904, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1790102, Length=201, Percent_Identity=23.3830845771144, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082052, Length=197, Percent_Identity=26.3959390862944, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 25841; Mature: 25710

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKDVNVSRGRAILTNMKIKILIADDNSFIREGMKIILNTYEEFEVVDTVNDGEEAVAY
CCCCCCCCCCCEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHH
CKKHEVDIALLDVRMPNMNGVEATKFICEETKTKPLILTTFDDDEYILDAVKNGAKGYLL
HHHCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCEEEE
KNNDPERIRDAIKGVYNGQTVMQDVVLDKIKSNLMESKEEECKIDKSLFTERELSIIALI
ECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEE
AKGFSNKEISKQLFISEGTIANYITSVLGKTGLEHRTQIAIYYLTGKVD
CCCCCCCCHHHHHEECCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCC
>Mature Secondary Structure 
GRKDVNVSRGRAILTNMKIKILIADDNSFIREGMKIILNTYEEFEVVDTVNDGEEAVAY
CCCCCCCCCCEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHH
CKKHEVDIALLDVRMPNMNGVEATKFICEETKTKPLILTTFDDDEYILDAVKNGAKGYLL
HHHCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCEEEE
KNNDPERIRDAIKGVYNGQTVMQDVVLDKIKSNLMESKEEECKIDKSLFTERELSIIALI
ECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEE
AKGFSNKEISKQLFISEGTIANYITSVLGKTGLEHRTQIAIYYLTGKVD
CCCCCCCCHHHHHEECCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]