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The map label for this gene is yizB [H]

Identifier: 218231600

GI number: 218231600

Start: 4046165

End: 4046497

Strand: Reverse

Name: yizB [H]

Synonym: BCB4264_A4136

Alternate gene names: 218231600

Gene position: 4046497-4046165 (Counterclockwise)

Preceding gene: 218234345

Following gene: 218235874

Centisome position: 74.67

GC content: 37.24

Gene sequence:

>333_bases
ATGTCGACAAGTCAAATGCTGAAAGGGATTTTAGAAGGATGCTTACTTGCTATTATTTCTGAAGGCGAAATATACGGTTA
TGAAATGAGTGAAAAGCTAGCGAAGTATGGTTTTACAATGGCGAGTGAGGGAAGTATTTATCCGTTATTAATACGAATGC
AAAAAGAAGGACTAATAACAAGCGTAATGAAGGAATCTCCATCTGGTCCAAAGAGAAAATATTATACATTAACAGAAAAA
GGCGAGGAAGCACTTGATGAATTTATGGATCGCTGGGAAACGATGCAAAGTAGTGTAGAACGTCTACTTGAAGGGAAGGG
AAGGAGAAAATAA

Upstream 100 bases:

>100_bases
TCCTGCAAACATTTGGAAAAAATATCGTTAGCTATCTTGTTTTGCAAAATAGTCTTTGCTATACTATTTTGTAAAGCAAG
ATAGTAGGAGGATTTGAATT

Downstream 100 bases:

>100_bases
TGCTATCAAGTGAAGCGCGAAAGTTTTTGTTAGATATGAGATTATTTTTGACGGCAAAGAGTGTGAAAGAAAGCGATATT
GAAAATTTTATAGAAGATGC

Product: transcriptional regulator, PadR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSTSQMLKGILEGCLLAIISEGEIYGYEMSEKLAKYGFTMASEGSIYPLLIRMQKEGLITSVMKESPSGPKRKYYTLTEK
GEEALDEFMDRWETMQSSVERLLEGKGRRK

Sequences:

>Translated_110_residues
MSTSQMLKGILEGCLLAIISEGEIYGYEMSEKLAKYGFTMASEGSIYPLLIRMQKEGLITSVMKESPSGPKRKYYTLTEK
GEEALDEFMDRWETMQSSVERLLEGKGRRK
>Mature_109_residues
STSQMLKGILEGCLLAIISEGEIYGYEMSEKLAKYGFTMASEGSIYPLLIRMQKEGLITSVMKESPSGPKRKYYTLTEKG
EEALDEFMDRWETMQSSVERLLEGKGRRK

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12517; Mature: 12386

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSQMLKGILEGCLLAIISEGEIYGYEMSEKLAKYGFTMASEGSIYPLLIRMQKEGLIT
CCHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCCCCCEEHHHEEHHHHHHHH
SVMKESPSGPKRKYYTLTEKGEEALDEFMDRWETMQSSVERLLEGKGRRK
HHHHCCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STSQMLKGILEGCLLAIISEGEIYGYEMSEKLAKYGFTMASEGSIYPLLIRMQKEGLIT
CHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCCCCCEEHHHEEHHHHHHHH
SVMKESPSGPKRKYYTLTEKGEEALDEFMDRWETMQSSVERLLEGKGRRK
HHHHCCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]