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The map label for this gene is ydiF [H]

Identifier: 218231435

GI number: 218231435

Start: 213026

End: 214906

Strand: Direct

Name: ydiF [H]

Synonym: BCB4264_A0243

Alternate gene names: 218231435

Gene position: 213026-214906 (Clockwise)

Preceding gene: 218234674

Following gene: 218235957

Centisome position: 3.93

GC content: 35.35

Gene sequence:

>1881_bases
ATGACTATTTGTAGTGTAAATAATGTAACGAAATCTTTTGGTGGAAACATCATATTTGAAAATATATCGCTTGAAATAAA
GAATGGTGAACGTGTTGGGTTAGTTGGTCGTAACGGTAGTGGGAAGACAACAATCTTTGGGCTTCTGACGGGAATGGAGA
GTTTGGATGCAGGAGCCATCCATATGAAGAAAGGTACACGTATTGGTCATGTCGCACAAATTCCGAAGTTTGATGAGTTC
ATGACTGTATATGATGTATTGAGTTCCGCTTTTAAAGTAGAAAAGGAATTAGAAAAAGAAATGCATGCTCTAGAAAAAAA
TATGGCGGAGGAGCAGGAACAATCTTCTTTGCAAAAGCTAATGGAGAGGTACGGAATAATTCAAGAAAAATTTGCATTTC
TCGGTGGTTATGAAATAGAGGCAAATATAATGAAGGTAGCAAATGGCTTACAAGTAACAGACTTATTTCCAAGAGTATTT
ACGGAATTAAGTGGAGGAGAACAGACGAAAGTAAGCCTTGCATATATGCTATTGCAGAAACCAGATTTACTTCTATTAGA
TGAACCAACAAATCATTTAGATTTGTTTGCAGTTGAATGGTTAGAGAAATTTTTAAAAGAATATAATGGAACAGTTATGG
TTATTTCACACGATCGCTATTTCCTTGATGAAGTTGTAACGAAAATTTTTGATCTGGAAGATGGAGAGATTCACGTGTAC
CATACGAATTATTCTCAGTTCGTTGAGGAGAAGGAAGAAAGATTACTTCAAGAGTTTCAAGCTTATCAAGAGCAGCAAAA
GAAAATAAAGAAAATGAAAGAAGCAATTAAGCGGCTACGTGAATGGGCAAATCAAGCGAATCCTCCGAATGAAGGATTGC
ATAAAAGAGCGAGGAATATGGAACGTGCGTTAGAGCGTATAGAGAAATTAAAGAGGCCGATTTTAGAAAGAAAACAGATG
GGTCTTCAGTTTGAAGGGCAAGAGAGAAGCGGAAAAGATGTTGTTGTAATGAAAGAAGTGAGTAAAGGTTTTGCTGGCCG
ATCTTTATTTGAACAAGCGAATTTACATGTTCGTTTTCAAGAGCGTGCTGCTATCGTTGGTCGTAATGGTACAGGAAAGA
CTACATTATTAAAACTACTATTAGAAGAAATAAATCCAGACGTTGGTGAAATTCGAATTGGTAGTAGTGTCAAAATTGGT
TATTTATCACAACATGCATATGAAAATATGAAGAGTAATGTATTGGAAGCATTCAGAGAGAATGTGGCTGTAACAGAGGG
AGAAGCAAGACATATATTAGCTAAGTTTTTGTTTTATGGTCCAGCAGTATTTAAGAAAGTAACGCAACTTAGTGGCGGAG
AAAAAATGAGATTAAGACTTGCGCAACTTATGTATCAAGACATCAATTTTCTAATTTTAGATGAGCCGACAAACCATCTT
GATATTGAATCAAGGGAAGTTTTAGAGGAAGCCCTTGAGCAATATAACGGAACGATTTTAGCTGTTTCACACGATCGCTA
TTTTTTAAATAAGTTATTTGAAAAGACGTACTGGATTGATAGATGCAAATTATTTGAGTTTGCAGGAAACTATGCATGGG
CTCGTCAAAAGTGGGAAGAAAAGCTTGAGGAGGAAGTAATAAAGCATAAGCACCATGGAAGAAAAAGTGTTGAAGCAATC
TCTATAAAAAAGAAAGATTCTAGAAGTTTTGCGGAGATTGAAAACGAGTTAATGCATATAGAAGAAGATATATATGCATT
AGAAAGTGAAATGGAATATGTAGCTGATGTTGAAAGACTTGAAAAATTATATGAGGAAAAAACGAAGAAAGAGTTGTTAC
GAGCAGATTTATATAATGAATTAGAGAATATGGTGGAGTAA

Upstream 100 bases:

>100_bases
AACGTGTGAAAAGGGAGCTATTTGGCTTCCTTTTTCTATGCCGAAAACCATGGGGAATGTTTCTTTCTCATGGTTTTTTA
TATTGAAAGGAGTACGGAAA

Downstream 100 bases:

>100_bases
TGAGTAGAAAGCCACTTCCTTTCAGTTTTGCTGGAGGAAGTGGCTTTTTTCATAATGATATTTTGCTTTAAAGGTTAAAT
GAAGCGATGTGTTTCACGTG

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFGLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDEF
MTVYDVLSSAFKVEKELEKEMHALEKNMAEEQEQSSLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTDLFPRVF
TELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEKFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
HTNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARNMERALERIEKLKRPILERKQM
GLQFEGQERSGKDVVVMKEVSKGFAGRSLFEQANLHVRFQERAAIVGRNGTGKTTLLKLLLEEINPDVGEIRIGSSVKIG
YLSQHAYENMKSNVLEAFRENVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDRCKLFEFAGNYAWARQKWEEKLEEEVIKHKHHGRKSVEAI
SIKKKDSRSFAEIENELMHIEEDIYALESEMEYVADVERLEKLYEEKTKKELLRADLYNELENMVE

Sequences:

>Translated_626_residues
MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFGLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDEF
MTVYDVLSSAFKVEKELEKEMHALEKNMAEEQEQSSLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTDLFPRVF
TELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEKFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
HTNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARNMERALERIEKLKRPILERKQM
GLQFEGQERSGKDVVVMKEVSKGFAGRSLFEQANLHVRFQERAAIVGRNGTGKTTLLKLLLEEINPDVGEIRIGSSVKIG
YLSQHAYENMKSNVLEAFRENVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDRCKLFEFAGNYAWARQKWEEKLEEEVIKHKHHGRKSVEAI
SIKKKDSRSFAEIENELMHIEEDIYALESEMEYVADVERLEKLYEEKTKKELLRADLYNELENMVE
>Mature_625_residues
TICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFGLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDEFM
TVYDVLSSAFKVEKELEKEMHALEKNMAEEQEQSSLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTDLFPRVFT
ELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEKFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVYH
TNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARNMERALERIEKLKRPILERKQMG
LQFEGQERSGKDVVVMKEVSKGFAGRSLFEQANLHVRFQERAAIVGRNGTGKTTLLKLLLEEINPDVGEIRIGSSVKIGY
LSQHAYENMKSNVLEAFRENVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHLD
IESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDRCKLFEFAGNYAWARQKWEEKLEEEVIKHKHHGRKSVEAIS
IKKKDSRSFAEIENELMHIEEDIYALESEMEYVADVERLEKLYEEKTKKELLRADLYNELENMVE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=522, Percent_Identity=32.3754789272031, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI27881506, Length=551, Percent_Identity=29.038112522686, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI10947137, Length=551, Percent_Identity=29.038112522686, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI10947135, Length=527, Percent_Identity=31.1195445920304, Blast_Score=199, Evalue=9e-51,
Organism=Homo sapiens, GI69354671, Length=527, Percent_Identity=31.1195445920304, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI156105685, Length=165, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI27881501, Length=227, Percent_Identity=27.3127753303965, Blast_Score=70, Evalue=8e-12,
Organism=Homo sapiens, GI30795238, Length=227, Percent_Identity=27.3127753303965, Blast_Score=70, Evalue=8e-12,
Organism=Homo sapiens, GI255708477, Length=197, Percent_Identity=30.4568527918782, Blast_Score=70, Evalue=8e-12,
Organism=Escherichia coli, GI1789751, Length=611, Percent_Identity=32.0785597381342, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI1787182, Length=630, Percent_Identity=33.1746031746032, Blast_Score=278, Evalue=8e-76,
Organism=Escherichia coli, GI1787041, Length=540, Percent_Identity=34.6296296296296, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI2367384, Length=529, Percent_Identity=33.0812854442344, Blast_Score=266, Evalue=3e-72,
Organism=Escherichia coli, GI1789593, Length=233, Percent_Identity=24.8927038626609, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI87081791, Length=222, Percent_Identity=28.8288288288288, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788165, Length=181, Percent_Identity=27.6243093922652, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788225, Length=225, Percent_Identity=30.2222222222222, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786345, Length=198, Percent_Identity=30.8080808080808, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1788506, Length=259, Percent_Identity=25.8687258687259, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787029, Length=231, Percent_Identity=29.004329004329, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787105, Length=230, Percent_Identity=25.6521739130435, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=553, Percent_Identity=30.379746835443, Blast_Score=236, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI17553372, Length=523, Percent_Identity=33.6520076481836, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17555318, Length=537, Percent_Identity=31.2849162011173, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI193208177, Length=248, Percent_Identity=27.8225806451613, Blast_Score=69, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=553, Percent_Identity=28.2097649186257, Blast_Score=222, Evalue=1e-58,
Organism=Saccharomyces cerevisiae, GI6321121, Length=533, Percent_Identity=32.0825515947467, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6325030, Length=409, Percent_Identity=25.6723716381418, Blast_Score=130, Evalue=9e-31,
Organism=Saccharomyces cerevisiae, GI6324314, Length=404, Percent_Identity=25.990099009901, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6323278, Length=404, Percent_Identity=25, Blast_Score=120, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24666836, Length=526, Percent_Identity=31.9391634980989, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24642252, Length=536, Percent_Identity=30.0373134328358, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI18859989, Length=536, Percent_Identity=30.0373134328358, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24641342, Length=552, Percent_Identity=30.2536231884058, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI281363262, Length=184, Percent_Identity=27.7173913043478, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24653245, Length=184, Percent_Identity=27.7173913043478, Blast_Score=73, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72569; Mature: 72438

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFGLLTGMESLDAGAI
CEEECCCHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCE
HMKKGTRIGHVAQIPKFDEFMTVYDVLSSAFKVEKELEKEMHALEKNMAEEQEQSSLQKL
EECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MERYGIIQEKFAFLGGYEIEANIMKVANGLQVTDLFPRVFTELSGGEQTKVSLAYMLLQK
HHHHCCHHHHHHHHCCCEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDLLLLDEPTNHLDLFAVEWLEKFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
CCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEE
HTNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARNM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ERALERIEKLKRPILERKQMGLQFEGQERSGKDVVVMKEVSKGFAGRSLFEQANLHVRFQ
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEHHHHCCCCCHHHHHHCCCEEEEE
ERAAIVGRNGTGKTTLLKLLLEEINPDVGEIRIGSSVKIGYLSQHAYENMKSNVLEAFRE
CCCCEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHH
NVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDRCKLFEFAGNYAWARQKWEE
CCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KLEEEVIKHKHHGRKSVEAISIKKKDSRSFAEIENELMHIEEDIYALESEMEYVADVERL
HHHHHHHHHHHCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLYEEKTKKELLRADLYNELENMVE
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFGLLTGMESLDAGAI
EEECCCHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCE
HMKKGTRIGHVAQIPKFDEFMTVYDVLSSAFKVEKELEKEMHALEKNMAEEQEQSSLQKL
EECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MERYGIIQEKFAFLGGYEIEANIMKVANGLQVTDLFPRVFTELSGGEQTKVSLAYMLLQK
HHHHCCHHHHHHHHCCCEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDLLLLDEPTNHLDLFAVEWLEKFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
CCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEE
HTNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARNM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ERALERIEKLKRPILERKQMGLQFEGQERSGKDVVVMKEVSKGFAGRSLFEQANLHVRFQ
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEHHHHCCCCCHHHHHHCCCEEEEE
ERAAIVGRNGTGKTTLLKLLLEEINPDVGEIRIGSSVKIGYLSQHAYENMKSNVLEAFRE
CCCCEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHH
NVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDRCKLFEFAGNYAWARQKWEE
CCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KLEEEVIKHKHHGRKSVEAISIKKKDSRSFAEIENELMHIEEDIYALESEMEYVADVERL
HHHHHHHHHHHCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLYEEKTKKELLRADLYNELENMVE
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]