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The map label for this gene is ypoP [H]

Identifier: 218231382

GI number: 218231382

Start: 1383043

End: 1383465

Strand: Direct

Name: ypoP [H]

Synonym: BCB4264_A1439

Alternate gene names: 218231382

Gene position: 1383043-1383465 (Clockwise)

Preceding gene: 218235365

Following gene: 218235734

Centisome position: 25.52

GC content: 32.62

Gene sequence:

>423_bases
ATGTTGTCTCAAAATCGAGAGCAATTAATGGAAGAACTATCGACAAATGTGTTTGCTATGTTTCGCACGTTGCGTAATGA
TATCGGAAAAATATTTGGTGGTTACATACCGTGGAATGAATTCATCGTCCTAAGAATATTAAATCGTACGAATAAAGAAA
TGGTATCGCGTGTAGCAAATGAATTAAATGTGTCGAATAGTCATATTACAGCTGTTACAGAAAAATTAATTAATAAGGGT
TTTGTAACTCGTTCACGTTCTACATCAGATCGCCGAGTTGTGTATTTAGAGATTACAGAACAAGGGAAAGATTTAGTTGC
GAAAATGGAAGATGCGAAAAAACAATATTTACAAGAAAGATTCTCTGCACTTTCAGAAGATGAAATGAATGTAATGATTT
CAATTTCCAAAAAACTTATTTAA

Upstream 100 bases:

>100_bases
AACTACGAATTATGGGAAAATAAGGTGACAAAAAGTAAGATTTCATGTAAAATTATTAATAAGGTTTTTATTTAACTAAA
TGAAATAAAAGGAGCTGTCA

Downstream 100 bases:

>100_bases
GTGATTATAAACAAGAAAACGCTTACGTGATAAAATAGAAGGTCTTCCTTATAGATGGGAGATCTTCTTTCGTGTGTAAT
AGATGTTAATAAATAAAATG

Product: transcriptional regulator, MarR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLSQNREQLMEELSTNVFAMFRTLRNDIGKIFGGYIPWNEFIVLRILNRTNKEMVSRVANELNVSNSHITAVTEKLINKG
FVTRSRSTSDRRVVYLEITEQGKDLVAKMEDAKKQYLQERFSALSEDEMNVMISISKKLI

Sequences:

>Translated_140_residues
MLSQNREQLMEELSTNVFAMFRTLRNDIGKIFGGYIPWNEFIVLRILNRTNKEMVSRVANELNVSNSHITAVTEKLINKG
FVTRSRSTSDRRVVYLEITEQGKDLVAKMEDAKKQYLQERFSALSEDEMNVMISISKKLI
>Mature_140_residues
MLSQNREQLMEELSTNVFAMFRTLRNDIGKIFGGYIPWNEFIVLRILNRTNKEMVSRVANELNVSNSHITAVTEKLINKG
FVTRSRSTSDRRVVYLEITEQGKDLVAKMEDAKKQYLQERFSALSEDEMNVMISISKKLI

Specific function: Negative Regulator Of The Multidrug Operon Emrab. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16251; Mature: 16251

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQNREQLMEELSTNVFAMFRTLRNDIGKIFGGYIPWNEFIVLRILNRTNKEMVSRVAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHH
ELNVSNSHITAVTEKLINKGFVTRSRSTSDRRVVYLEITEQGKDLVAKMEDAKKQYLQER
HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
FSALSEDEMNVMISISKKLI
HHHCCCCCHHHHEEECCCCC
>Mature Secondary Structure
MLSQNREQLMEELSTNVFAMFRTLRNDIGKIFGGYIPWNEFIVLRILNRTNKEMVSRVAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHH
ELNVSNSHITAVTEKLINKGFVTRSRSTSDRRVVYLEITEQGKDLVAKMEDAKKQYLQER
HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
FSALSEDEMNVMISISKKLI
HHHCCCCCHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]