Click here to switch to the map view.

The map label for this gene is sapB [C]

Identifier: 218231255

GI number: 218231255

Start: 2152196

End: 2153098

Strand: Reverse

Name: sapB [C]

Synonym: BCB4264_A2252

Alternate gene names: 218231255

Gene position: 2153098-2152196 (Counterclockwise)

Preceding gene: 218232705

Following gene: 218234942

Centisome position: 39.73

GC content: 28.02

Gene sequence:

>903_bases
ATGTTAAATAAAATATCTCAATTCACAATTAAGCTTTCATCAATTCTTTTATCACTCTTACTATTATTAAATTTACCTTA
TTTATTTATTACTCAACAAGGATTTACCTTTCAACCAATTTATTTTTTTAATCAGACCGTTACTATGTTAAAACAGGTTT
TTTCCCCTGAATCATTAGTGATTATAGGATCAGACCCGAAGTTTGGCCATTTCAAAAAAACACCATTATTTCCAACTGTT
TTAGAACCTTACCTATATTCATTTACTATATTATTTTTAGCCTTTTTTCTTGCTCTCTTTTTATCATCTAGCATGGCATT
TTTGTATTTTTTAGCAAAAGATTATATAAAAAAATGGATAAACCGAATTGTGTTCATATTAGAAGCTGTCCCTGATATGA
TGATGATGATTTGTTTGCAAATTTTTTTCATATGGGTACTTCAGAAATTTGGGGAATCTCCTGTCACTATTATTTCCTTT
AATGAAAATCGAGCTTATTTACTCCCTATTTTATCATTAGCTGTCTTACCTACATTACAAATGTTTCGGATGATGGTGTT
ATACATAAAAGAAGAGCAAGGAAAACATTACGTAGAGGTTGCATATGGAAAAGGCCTTTCATCAAGTTATATACTATGCA
TTCATTTATTCAAAAATATATCTATCCACTTCTTCCACCATTTAAAAACGATTTTTGTTTTCTTACTTTCTAATTTATTC
ATTTTAGAATTTGTTTTTAATATGGAAGGCATTATTCAATTTTTATTTAATAAGGCGTTTGTTTCACCTCCAGCTGCATT
TATCATACTTGTTATGATTATTTTACCATTTTATGCTATTTTCCAAATAGTCTCATTCATGATGAATAGATGGAAAAAGC
AATTGAAAGGAGTATCATTATGA

Upstream 100 bases:

>100_bases
CATACTATAAAATCGAAAAGTATTTTTATTTTTCAGAAAAATAAAAACAATAACACGAAATTTATTGTATAATGTTGTAA
AAAGATGTCGGAGGGATTTA

Downstream 100 bases:

>100_bases
AATCTATTTGGAAATCAAAACGCTTTTTAATCGGCTTTACTTATCTATTCATACTTATTTCAGCTAGTTTTATTTATAGT
TGGTTCTTTAAAGATAACAT

Product: hypothetical protein

Products: ADP; phosphate; peptides [Cytoplasm] [C]

Alternate protein names: Oligopeptide Transport System Permease Protein-Like Protein

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MLNKISQFTIKLSSILLSLLLLLNLPYLFITQQGFTFQPIYFFNQTVTMLKQVFSPESLVIIGSDPKFGHFKKTPLFPTV
LEPYLYSFTILFLAFFLALFLSSSMAFLYFLAKDYIKKWINRIVFILEAVPDMMMMICLQIFFIWVLQKFGESPVTIISF
NENRAYLLPILSLAVLPTLQMFRMMVLYIKEEQGKHYVEVAYGKGLSSSYILCIHLFKNISIHFFHHLKTIFVFLLSNLF
ILEFVFNMEGIIQFLFNKAFVSPPAAFIILVMIILPFYAIFQIVSFMMNRWKKQLKGVSL

Sequences:

>Translated_300_residues
MLNKISQFTIKLSSILLSLLLLLNLPYLFITQQGFTFQPIYFFNQTVTMLKQVFSPESLVIIGSDPKFGHFKKTPLFPTV
LEPYLYSFTILFLAFFLALFLSSSMAFLYFLAKDYIKKWINRIVFILEAVPDMMMMICLQIFFIWVLQKFGESPVTIISF
NENRAYLLPILSLAVLPTLQMFRMMVLYIKEEQGKHYVEVAYGKGLSSSYILCIHLFKNISIHFFHHLKTIFVFLLSNLF
ILEFVFNMEGIIQFLFNKAFVSPPAAFIILVMIILPFYAIFQIVSFMMNRWKKQLKGVSL
>Mature_300_residues
MLNKISQFTIKLSSILLSLLLLLNLPYLFITQQGFTFQPIYFFNQTVTMLKQVFSPESLVIIGSDPKFGHFKKTPLFPTV
LEPYLYSFTILFLAFFLALFLSSSMAFLYFLAKDYIKKWINRIVFILEAVPDMMMMICLQIFFIWVLQKFGESPVTIISF
NENRAYLLPILSLAVLPTLQMFRMMVLYIKEEQGKHYVEVAYGKGLSSSYILCIHLFKNISIHFFHHLKTIFVFLLSNLF
ILEFVFNMEGIIQFLFNKAFVSPPAAFIILVMIILPFYAIFQIVSFMMNRWKKQLKGVSL

Specific function: Involved In A Peptide Intake Transport System That Plays A Role In The Resistance To Antimicrobial Peptides. [C]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35089; Mature: 35089

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKISQFTIKLSSILLSLLLLLNLPYLFITQQGFTFQPIYFFNQTVTMLKQVFSPESLV
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECHHHHHHHHHHHHHHHCCCCCEE
IIGSDPKFGHFKKTPLFPTVLEPYLYSFTILFLAFFLALFLSSSMAFLYFLAKDYIKKWI
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRIVFILEAVPDMMMMICLQIFFIWVLQKFGESPVTIISFNENRAYLLPILSLAVLPTLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
MFRMMVLYIKEEQGKHYVEVAYGKGLSSSYILCIHLFKNISIHFFHHLKTIFVFLLSNLF
HHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILEFVFNMEGIIQFLFNKAFVSPPAAFIILVMIILPFYAIFQIVSFMMNRWKKQLKGVSL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLNKISQFTIKLSSILLSLLLLLNLPYLFITQQGFTFQPIYFFNQTVTMLKQVFSPESLV
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECHHHHHHHHHHHHHHHCCCCCEE
IIGSDPKFGHFKKTPLFPTVLEPYLYSFTILFLAFFLALFLSSSMAFLYFLAKDYIKKWI
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRIVFILEAVPDMMMMICLQIFFIWVLQKFGESPVTIISFNENRAYLLPILSLAVLPTLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
MFRMMVLYIKEEQGKHYVEVAYGKGLSSSYILCIHLFKNISIHFFHHLKTIFVFLLSNLF
HHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILEFVFNMEGIIQFLFNKAFVSPPAAFIILVMIILPFYAIFQIVSFMMNRWKKQLKGVSL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; peptides [Periplasm]; H2O [C]

Specific reaction: ATP + peptides [Periplasm] + H2O = ADP + phosphate + peptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA