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The map label for this gene is flgC [H]

Identifier: 218230982

GI number: 218230982

Start: 1628231

End: 1628644

Strand: Direct

Name: flgC [H]

Synonym: BCB4264_A1710

Alternate gene names: 218230982

Gene position: 1628231-1628644 (Clockwise)

Preceding gene: 218232483

Following gene: 218231410

Centisome position: 30.05

GC content: 38.65

Gene sequence:

>414_bases
ATGTTTCAGGCAATTAATGCAAGTGGCTCAGGACTAACGACAGCGAGAAAGTGGATGGAAGTTACTTCTAACAATATTGT
AAATGCAAATACGACGGCGGCTCCGGGGGCAGATTTATATGAGCGTCGTAGTGTGGTGCTAGAATCAAACAATAGTTTTG
CAAGTATGCTAGATGGGGCTCCTACTAACGGAGTAAAAATAAAAAGTATTGAAGCAGACAAAACGGAAAATTTAGTGTAT
GATCCGACGCATCCGCACGCAAATAAAGAAGGATATGTACGTTATCCCAATATTGATGTAACTGCTGAAATGACGAATGT
AATGGTTGCTCAAAAAATGTATGAAGCGAATACGAGTGTATTAAATGCGAATAAAAAAATGCTTGATAAAGATTTAGAAA
TCGGCCGAGGATAA

Upstream 100 bases:

>100_bases
AGCAAATCAGTTATACGGTATTTCAGTTAACGCAATTAATACACAATATGCAATTAACCAAGCGGCACGCGGACGTTAAA
AGTAGAAGGAGAGACAACGG

Downstream 100 bases:

>100_bases
GGGGGAAAATCGTAATATGAAAATTCAACCAATGTTACATACACAACCATTTGGAGCAATTCAGTCAATTGGTGCACCGA
AAACTTCTCAAACATCTGTA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFASMLDGAPTNGVKIKSIEADKTENLVY
DPTHPHANKEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDKDLEIGRG

Sequences:

>Translated_137_residues
MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFASMLDGAPTNGVKIKSIEADKTENLVY
DPTHPHANKEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDKDLEIGRG
>Mature_137_residues
MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFASMLDGAPTNGVKIKSIEADKTENLVY
DPTHPHANKEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDKDLEIGRG

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=137, Percent_Identity=36.4963503649635, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14956; Mature: 14956

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFASMLDGA
CCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCHHHCCEEEEECCCCHHHHHCCC
PTNGVKIKSIEADKTENLVYDPTHPHANKEGYVRYPNIDVTAEMTNVMVAQKMYEANTSV
CCCCEEEEEECCCCCCCEEECCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHCCCCE
LNANKKMLDKDLEIGRG
ECCCHHHHHHCCCCCCC
>Mature Secondary Structure
MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFASMLDGA
CCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCHHHCCEEEEECCCCHHHHHCCC
PTNGVKIKSIEADKTENLVYDPTHPHANKEGYVRYPNIDVTAEMTNVMVAQKMYEANTSV
CCCCEEEEEECCCCCCCEEECCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHCCCCE
LNANKKMLDKDLEIGRG
ECCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]