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The map label for this gene is yhjP [H]

Identifier: 218230970

GI number: 218230970

Start: 2779714

End: 2781450

Strand: Reverse

Name: yhjP [H]

Synonym: BCB4264_A2898

Alternate gene names: 218230970

Gene position: 2781450-2779714 (Counterclockwise)

Preceding gene: 218235283

Following gene: 218231640

Centisome position: 51.33

GC content: 33.97

Gene sequence:

>1737_bases
ATGTTTATTTTAGATCAATACATTGAACTATGGATTGCTTATGGAAAAGGAAAAAAAGAGGGAGAACGATTGGAAGTAAC
AGTGCAAAATATATCTGGTACATTATTTTGTACAGAGCGCAATAGTAAATTAATTATAAAAAAATTAGATGAGTTAAATT
GGATTAAGTGGTTTCCAGGTCGCGGCAGAGGAAATCGGTCTAAGTTAATATTTCAAAAGCACCCGATATCTTTAATTTTA
GATAGAGGAAAAGAAATAACGAAAAAAGGGGATGTGAAAAGCGGAAGTATATTTGTGGAACGCTATAGCTCACATTTTCC
ATCGGTAAAGGGAGAATATCATTCCTGGGTGGATTCAATATTTGGTCATAAGGTTGAAATGACATCTGAAGGGAGAAGAG
ATGTACTCCGGTTGCAAGTACAAATGAATTTAGATATCACATTAGATCCTGTATACGCTACAATGCGCTCAGAATGCCAT
ATGGTAAAACATATATTCGACACACTCGTGTATGTAGACGGTAATACAAACATTATAGAGCCAAGACTTGCATTTCACTG
GGAATATAATGACGCTGAAAAAATATGGACGTTTTACTTACGAAAAGGAGTTCACTTTCATAATGGAAAACAACTTACTG
CACATGATGTTATATACTCGTTGAATCGATTTATGAAGCTGGAAAATAATGCACACGCATGGATGTTACAACACGTTGAA
AGTATCCGTTCAGTGGATGACTACGTTTTCGAAATTCAATTACATACAGAAAATCGAATGTTTTTACATATGCTAAGTGC
AGAACAGTGTTCTATCGTGAATGAAGATGAAGCAGGAGGGCTAATTGGAACCGGGCCTTTTCAATTATATAAAAGTAATG
AAAATCTGTTCATTTTAGAAGGACATCCTTTATATTTTCGTGAAAGACCTTTTTTAGATCGTGTTGAGTTGTGGAATGTA
GAACAAGGTGTAAGTACATACGATGTTTTAGTAAAGGCGCAGTATAAAGATAAAGAAAAACATAATAAAGAATTGTCCCG
GCTTGAGTCGAACGTGACATATATAACATGTAATCTTACGAAAGAAGGACCAATGCAAGATGCGTTATTTCGGAAAGCGT
TATATAACATCATTCATGGTTATACAATCGTTCAAGAACTCGGCGGAGAACGTGGAGAAGTAGCAAAAAAACTAATATTA
GCAGGTGCAAGCATTGTAGAGATTGAGGAAGATGTAGAAAGTTTAATTAAAAGGAGTACTTATCATAATGAAGTGCTACA
ACTCTACACATTTACAGGACGAGATCATGTTGAAGATGCACAGTGGATACAAAAAGAGTGTGCGAAATACGGGATTCGTG
TAGAAAATAATTTTCTTGATATAGAAGAGCTATTGGAAATAAGTACGATAAAAAAGGCCGATATGATGCATGATAGTGCC
ACAATTAGTGAACGAATAGAAGATAGTCTATTATATATGTTTCTTACAAAAAATAGTTTTATTCATGGACAAAGCAGCAT
GGACTTTCATGAAAAGTTGTCTCCTTATTTTAGACAAGAAGAATTAGAGAAAAGAGTTACACTGTTACGCGATATCGAGG
ATACTTTGTTACGTCAAATTCATGTTATTCCTTTATATCGTAATAAACAAGAGGTAAGTACACATGAAAAAGTTCAAAAT
ATAATGATTAATTCACAAGGTTGGATTGATTTTTATAATATTTGGTTTAAGTCTTGA

Upstream 100 bases:

>100_bases
ATTAATTCCTCCTTTCTATATTGAAATGATAAGATGAAAGGAGAGTTGGAAAAAGGGTAGAAACTATAGGGAGGATTTTT
CACCTTTTAGGGGGAGTATG

Downstream 100 bases:

>100_bases
TATATAAGGGCTTTTGCACATTTTCATAAGGTGTGTAAGAGCCTTTTTTGTATGTAGGAATAGGTTTGTTTTACACATTG
TTACGCTACTTGTGATAAAA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MFILDQYIELWIAYGKGKKEGERLEVTVQNISGTLFCTERNSKLIIKKLDELNWIKWFPGRGRGNRSKLIFQKHPISLIL
DRGKEITKKGDVKSGSIFVERYSSHFPSVKGEYHSWVDSIFGHKVEMTSEGRRDVLRLQVQMNLDITLDPVYATMRSECH
MVKHIFDTLVYVDGNTNIIEPRLAFHWEYNDAEKIWTFYLRKGVHFHNGKQLTAHDVIYSLNRFMKLENNAHAWMLQHVE
SIRSVDDYVFEIQLHTENRMFLHMLSAEQCSIVNEDEAGGLIGTGPFQLYKSNENLFILEGHPLYFRERPFLDRVELWNV
EQGVSTYDVLVKAQYKDKEKHNKELSRLESNVTYITCNLTKEGPMQDALFRKALYNIIHGYTIVQELGGERGEVAKKLIL
AGASIVEIEEDVESLIKRSTYHNEVLQLYTFTGRDHVEDAQWIQKECAKYGIRVENNFLDIEELLEISTIKKADMMHDSA
TISERIEDSLLYMFLTKNSFIHGQSSMDFHEKLSPYFRQEELEKRVTLLRDIEDTLLRQIHVIPLYRNKQEVSTHEKVQN
IMINSQGWIDFYNIWFKS

Sequences:

>Translated_578_residues
MFILDQYIELWIAYGKGKKEGERLEVTVQNISGTLFCTERNSKLIIKKLDELNWIKWFPGRGRGNRSKLIFQKHPISLIL
DRGKEITKKGDVKSGSIFVERYSSHFPSVKGEYHSWVDSIFGHKVEMTSEGRRDVLRLQVQMNLDITLDPVYATMRSECH
MVKHIFDTLVYVDGNTNIIEPRLAFHWEYNDAEKIWTFYLRKGVHFHNGKQLTAHDVIYSLNRFMKLENNAHAWMLQHVE
SIRSVDDYVFEIQLHTENRMFLHMLSAEQCSIVNEDEAGGLIGTGPFQLYKSNENLFILEGHPLYFRERPFLDRVELWNV
EQGVSTYDVLVKAQYKDKEKHNKELSRLESNVTYITCNLTKEGPMQDALFRKALYNIIHGYTIVQELGGERGEVAKKLIL
AGASIVEIEEDVESLIKRSTYHNEVLQLYTFTGRDHVEDAQWIQKECAKYGIRVENNFLDIEELLEISTIKKADMMHDSA
TISERIEDSLLYMFLTKNSFIHGQSSMDFHEKLSPYFRQEELEKRVTLLRDIEDTLLRQIHVIPLYRNKQEVSTHEKVQN
IMINSQGWIDFYNIWFKS
>Mature_578_residues
MFILDQYIELWIAYGKGKKEGERLEVTVQNISGTLFCTERNSKLIIKKLDELNWIKWFPGRGRGNRSKLIFQKHPISLIL
DRGKEITKKGDVKSGSIFVERYSSHFPSVKGEYHSWVDSIFGHKVEMTSEGRRDVLRLQVQMNLDITLDPVYATMRSECH
MVKHIFDTLVYVDGNTNIIEPRLAFHWEYNDAEKIWTFYLRKGVHFHNGKQLTAHDVIYSLNRFMKLENNAHAWMLQHVE
SIRSVDDYVFEIQLHTENRMFLHMLSAEQCSIVNEDEAGGLIGTGPFQLYKSNENLFILEGHPLYFRERPFLDRVELWNV
EQGVSTYDVLVKAQYKDKEKHNKELSRLESNVTYITCNLTKEGPMQDALFRKALYNIIHGYTIVQELGGERGEVAKKLIL
AGASIVEIEEDVESLIKRSTYHNEVLQLYTFTGRDHVEDAQWIQKECAKYGIRVENNFLDIEELLEISTIKKADMMHDSA
TISERIEDSLLYMFLTKNSFIHGQSSMDFHEKLSPYFRQEELEKRVTLLRDIEDTLLRQIHVIPLYRNKQEVSTHEKVQN
IMINSQGWIDFYNIWFKS

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786650, Length=596, Percent_Identity=23.6577181208054, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1786256, Length=358, Percent_Identity=25.1396648044693, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1789966, Length=271, Percent_Identity=25.830258302583, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787551, Length=482, Percent_Identity=19.5020746887967, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 67843; Mature: 67843

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFILDQYIELWIAYGKGKKEGERLEVTVQNISGTLFCTERNSKLIIKKLDELNWIKWFPG
CCCHHHHHHHHEEECCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEHHCCCCCEEECCC
RGRGNRSKLIFQKHPISLILDRGKEITKKGDVKSGSIFVERYSSHFPSVKGEYHSWVDSI
CCCCCCCCEEEEECCHHHEECCCCHHHHCCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHH
FGHKVEMTSEGRRDVLRLQVQMNLDITLDPVYATMRSECHMVKHIFDTLVYVDGNTNIIE
CCCEEEECCCCCCEEEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHCEEEECCCCCEEC
PRLAFHWEYNDAEKIWTFYLRKGVHFHNGKQLTAHDVIYSLNRFMKLENNAHAWMLQHVE
CCEEEEEECCCHHHHHHHHHHCCCEECCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SIRSVDDYVFEIQLHTENRMFLHMLSAEQCSIVNEDEAGGLIGTGPFQLYKSNENLFILE
HHHCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEECCCCEEEEE
GHPLYFRERPFLDRVELWNVEQGVSTYDVLVKAQYKDKEKHNKELSRLESNVTYITCNLT
CCCEEEECCCCCCHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
KEGPMQDALFRKALYNIIHGYTIVQELGGERGEVAKKLILAGASIVEIEEDVESLIKRST
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
YHNEVLQLYTFTGRDHVEDAQWIQKECAKYGIRVENNFLDIEELLEISTIKKADMMHDSA
HHHHEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCHH
TISERIEDSLLYMFLTKNSFIHGQSSMDFHEKLSPYFRQEELEKRVTLLRDIEDTLLRQI
HHHHHHHHHEEEEEEECCCEECCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHE
HVIPLYRNKQEVSTHEKVQNIMINSQGWIDFYNIWFKS
EEEEEECCCHHHHHHHHHHHHEECCCCCEEEEEEEECC
>Mature Secondary Structure
MFILDQYIELWIAYGKGKKEGERLEVTVQNISGTLFCTERNSKLIIKKLDELNWIKWFPG
CCCHHHHHHHHEEECCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEHHCCCCCEEECCC
RGRGNRSKLIFQKHPISLILDRGKEITKKGDVKSGSIFVERYSSHFPSVKGEYHSWVDSI
CCCCCCCCEEEEECCHHHEECCCCHHHHCCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHH
FGHKVEMTSEGRRDVLRLQVQMNLDITLDPVYATMRSECHMVKHIFDTLVYVDGNTNIIE
CCCEEEECCCCCCEEEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHCEEEECCCCCEEC
PRLAFHWEYNDAEKIWTFYLRKGVHFHNGKQLTAHDVIYSLNRFMKLENNAHAWMLQHVE
CCEEEEEECCCHHHHHHHHHHCCCEECCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SIRSVDDYVFEIQLHTENRMFLHMLSAEQCSIVNEDEAGGLIGTGPFQLYKSNENLFILE
HHHCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEECCCCEEEEE
GHPLYFRERPFLDRVELWNVEQGVSTYDVLVKAQYKDKEKHNKELSRLESNVTYITCNLT
CCCEEEECCCCCCHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
KEGPMQDALFRKALYNIIHGYTIVQELGGERGEVAKKLILAGASIVEIEEDVESLIKRST
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
YHNEVLQLYTFTGRDHVEDAQWIQKECAKYGIRVENNFLDIEELLEISTIKKADMMHDSA
HHHHEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCHH
TISERIEDSLLYMFLTKNSFIHGQSSMDFHEKLSPYFRQEELEKRVTLLRDIEDTLLRQI
HHHHHHHHHEEEEEEECCCEECCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHE
HVIPLYRNKQEVSTHEKVQNIMINSQGWIDFYNIWFKS
EEEEEECCCHHHHHHHHHHHHEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]