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The map label for this gene is flaA [H]

Identifier: 218230951

GI number: 218230951

Start: 1641940

End: 1643043

Strand: Reverse

Name: flaA [H]

Synonym: BCB4264_A1726

Alternate gene names: 218230951

Gene position: 1643043-1641940 (Counterclockwise)

Preceding gene: 218232751

Following gene: 218231678

Centisome position: 30.32

GC content: 38.68

Gene sequence:

>1104_bases
ATGAGAATTAATACAAACATTAACAGCATGCGTACTCAAGAGTACATGCGCCAAAACCAAGCTAAAATGAGCAACGCTAT
GGACCGTTTATCAAGCGGTAAACGTATCAACAACGCTTCTGACGATGCAGCAGGTCTTGCAATCGCAACTCGTATGCGTG
CACGTGAAAGCGGATTAGGAGTTGCAGCTAACAACACTCAAGACGGTATGTCATTAATCCGTACAGCTGACTCAGCTTTA
AACTCTGTATCTAACATCTTACTTCGTATGCGTGACCTTGCGAACCAATCAGCAAATGGTACAAATACGGCGGAAAATAA
AGCAGCAATGCAAAAAGAATTTGGCGAACTAAAAGATCAAATTAAATATATTTCTGAAAACACACAGTTTAATGATCAAC
ACTTATTAAATGCAGCTAAAGGATCAACGAATGAAATCGCTATTCAGACTCTTGATTCAGATAGCTCTTCAAAACAAATT
AAAATCACATTACAAGGTGCTTCACTGGACTCTTTAGATATTAAAGATTTACAAATCGGTAGTGGTTCTACTGTAAGTCA
AACAGATCTTGACGTACTAGATGCAACAATGACTAGAGTAAAAACAGCAACAGGTGCAACTCGTGATGTAGATGTACAAG
CTGCTAAAAGTGCTTTTGATAAAGTAAAAGGTTTAATGACAAAACCAGCTGAAGTTAAAGCAATTGAAAGAGCATTTGAA
GATTATAATGCTGGTAAAACTGATGCATTAGCAACAGCAATCGAAGCAGCATACACAGCTAATAAAACTGGATTACCAGC
TCCAGCCGCTGCTGCAGGAACAGTCGATGCATTAGGTGCTATTACAAAAATTGATGCAGCTCTAAAAACAGTGGCTGACA
ACCGTGCAACTCTAGGTGCTACATTAAACCGTCTTGACTTTAACGTAAATAACCTTAAGAGCCAATCTGCTAGCATGGCT
TCAGCTGCTTCTCAAATCGAAGACGCTGACATGGCGAAAGAAATGTCTGAAATGACTAAGTTCAAAATCTTGAACGAAGC
TGGTATCAGCATGCTTTCTCAAGCAAACCAAACTCCACAAATGGTTTCTAAATTATTACAATAA

Upstream 100 bases:

>100_bases
TGTGGCAAGGATTACAATAAATCTCGAAATTGATTTTTTCGCATATTACCGTTTTTCAATTTGCAGAAAAGTCAATATAA
AAAAATGGGGGTTTCTTAAC

Downstream 100 bases:

>100_bases
GCCATTTGAGTTAGTTTCCTGAATAAACCTCTCTGCTTGCGGAGAGGTTTATTTTTTATAAAAACTTCCTTTTTTTGATG
GAAGAGAGCATCTGCAATGC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MRINTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL
NSVSNILLRMRDLANQSANGTNTAENKAAMQKEFGELKDQIKYISENTQFNDQHLLNAAKGSTNEIAIQTLDSDSSSKQI
KITLQGASLDSLDIKDLQIGSGSTVSQTDLDVLDATMTRVKTATGATRDVDVQAAKSAFDKVKGLMTKPAEVKAIERAFE
DYNAGKTDALATAIEAAYTANKTGLPAPAAAAGTVDALGAITKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSASMA
SAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ

Sequences:

>Translated_367_residues
MRINTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL
NSVSNILLRMRDLANQSANGTNTAENKAAMQKEFGELKDQIKYISENTQFNDQHLLNAAKGSTNEIAIQTLDSDSSSKQI
KITLQGASLDSLDIKDLQIGSGSTVSQTDLDVLDATMTRVKTATGATRDVDVQAAKSAFDKVKGLMTKPAEVKAIERAFE
DYNAGKTDALATAIEAAYTANKTGLPAPAAAAGTVDALGAITKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSASMA
SAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ
>Mature_367_residues
MRINTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL
NSVSNILLRMRDLANQSANGTNTAENKAAMQKEFGELKDQIKYISENTQFNDQHLLNAAKGSTNEIAIQTLDSDSSSKQI
KITLQGASLDSLDIKDLQIGSGSTVSQTDLDVLDATMTRVKTATGATRDVDVQAAKSAFDKVKGLMTKPAEVKAIERAFE
DYNAGKTDALATAIEAAYTANKTGLPAPAAAAGTVDALGAITKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSASMA
SAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaA is essential for flagellar synthesis and full motility. Important for virulence at two different levels:is needed for crossing the fish integument and may

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=134, Percent_Identity=43.2835820895522, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 39071; Mature: 39071

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRINTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLG
CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
VAANNTQDGMSLIRTADSALNSVSNILLRMRDLANQSANGTNTAENKAAMQKEFGELKDQ
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
IKYISENTQFNDQHLLNAAKGSTNEIAIQTLDSDSSSKQIKITLQGASLDSLDIKDLQIG
HHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEECC
SGSTVSQTDLDVLDATMTRVKTATGATRDVDVQAAKSAFDKVKGLMTKPAEVKAIERAFE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DYNAGKTDALATAIEAAYTANKTGLPAPAAAAGTVDALGAITKIDAALKTVADNRATLGA
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHCCCHHHHH
TLNRLDFNVNNLKSQSASMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
MVSKLLQ
HHHHHHC
>Mature Secondary Structure
MRINTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLG
CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
VAANNTQDGMSLIRTADSALNSVSNILLRMRDLANQSANGTNTAENKAAMQKEFGELKDQ
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
IKYISENTQFNDQHLLNAAKGSTNEIAIQTLDSDSSSKQIKITLQGASLDSLDIKDLQIG
HHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEECC
SGSTVSQTDLDVLDATMTRVKTATGATRDVDVQAAKSAFDKVKGLMTKPAEVKAIERAFE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DYNAGKTDALATAIEAAYTANKTGLPAPAAAAGTVDALGAITKIDAALKTVADNRATLGA
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHCCCHHHHH
TLNRLDFNVNNLKSQSASMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
MVSKLLQ
HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631707 [H]