| Definition | Shewanella baltica OS223 chromosome, complete genome. |
|---|---|
| Accession | NC_011663 |
| Length | 5,145,902 |
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Identifier: 217974628
GI number:
Start: 4131098
End: 4134211
Strand: Direct
Name: Not Available
Synonym: Sbal223_3473
Alternate gene names: NA
Gene position: NA
Preceding gene: 217974627
Following gene: 217974629
Centisome position: NA
GC content: NA
Gene sequence:
>3114_bases ATGACGACTTATAAAGCGGTGGCAGAATCCAATAACTTTATTGTGTTAGATAAATACACTAAAGAGTGGCAGGTTAACGA AAGCTTTCAAAGCGAAGGTGATTTAGAACGTGAGCTGATTCAGGACCTAAGCAACCAGGGCTATGAGTATTTATCGGCAC TAACCACGCCCGATGCCATGCTGGCGAATGTGCGCAAGCAGCTACAAGCCCTTAATAAGGTCGAATTTACCGATGCCGAG TGGGCTCGCTTTTGCGAGCAATACCTGAACACACCAAGCGACAATATTCTTGATAAAACTCGCAAAGTGCACAGTGACTA TATTTTCGATTTTGTCTTTGATGATGGCCATATAGAAAACATCTACCTGTTTGATAAGAAGACCATTGCTCGTAACAAAG TGCAGGTCATTAAGCAGTTTGAGCAAACGGGAAGCCATGCCAACCGTTACGATGTGACGATTTTGATCAATGGTTTGCCT TTGGTGCAAATCGAACTGAAAAAGCGTGGTGTGGCGATCCGTGAGGCGTTTAATCAAATACATCGCTACAGCAAAGAAAG CTTTAATAGCGATCACTCCTTGTACAAGTTCTTGCAGCTTTTTGTGATCTCTAATGGCACCGACACGCGCTATTTTGCCA ATACCACCAAGCGCGACAAAAACAGCTTCGATTTTACGATGAACTGGGCGAAGTCAGACAATACGCTGATCAAGGATTTA AAAGACTTTACCGCCACTTTTTTCCAGAAAGAGACCTTGCTTGAAGTGATCTTGCGTTACTCGGTGTTTGACGTCAGCAA TACCTTACTTGTAATGCGCCCTTACCAAATTGCGGCTACTGAGCGCATTTTATGGAAGATAAAGAGCGCGTTTAACGCTA AGAACTGGAGCAGCACCGAGAGCGGTGGGTACATTTGGCACACTACGGGTTCAGGCAAAACACTCACCAGCTTTAAAGCG GCACGTTTGGCCACCGATTTAGACTGTATCGATAAAGTCTTCTTTGTGGTGGACCGAAAAGACCTCGACTATCAGACGAT GAAAGAGTATCAGCGGTTCTCGCCTGATAGTGTGAACGGTTCAGACAGTACCGCAGGGCTTAAGAGTAACCTGGATAAAG ACGATAACAAGATTGTCGTCACCACAATCCAAAAGCTCAACAACTTAATCAAAAGCGAAAGCGATTTAGCTATATACAAC AAGCAAGTCGTTTTTATTTTTGATGAGTGTCATCGAAGCCAGTTCGGTGAGGCGCAGAAAAACCTGAAGAAGAAATTCAA AAAGTACTACCAGTTTGGCTTCACAGGTACGCCCATTTTCCCAGAAAATGCACTGGGCGCAGAAACCACGGGTAGCGTGT TTGGCCAGCAGTTGCACACGTATGTGATCACCGATGCCATTCGTGATGAAAAAGTACTCAAGTTCAAAGTGGACTATAAC GATGTTCGTCCGCAATTTAAGAGCATTGAGACTGAGCAGGATGATAAGAAGCTTAGTGCGGCGGAGAATAAGAAAGCCTT CTTACATCCAATGCGCATTGGTGAAATCTCGCAGTATATTCTGAGCCATTTTAACCAGAAAACACATCGAGCCTATTCTG GCGCCAAAGGGTTTAACGCCATGTTTGCGGTCAGTAGTGTTGATGCGGCGAAAGCCTACTATGAAACCTTCAAAACATTG CAGGCCGAGGCTGAGAATGGACCTACAAGTAAACCTCTGCGCATTGCAACTATCTTCTCATTTGCTGCCAATGAAGAGCA GGACGCCATTGGTGATATTTTAGATGAGAGCTTTGAAGTAAGTAGCATGAACAGCAGCGCAAAAGAGTTTTTGAGCGCCG CGATTAAAGATTACAACGCCATGTTTAAATCTAACTATGGCGTGGACAGTAATGGCTTTCAGAACTACTACCGTGACCTT GCTCAACGGGTGAAGAATCAAGAAATAGATCTGCTCATAGTGGTGGGGATGTTTTTAACGGGCTTTGATGCGCCTACGCT TAACACCTTGTTTGTTGATAAGAATTTGCGCTATCACGGCTTGATGCAGGCATTTTCTCGCACTAACCGCATTTATGATG CGACGAAGACCTTTGGCAATATTGTTACCTTCCGTGATTTGGAACAGGCAACCATTGATGCAATCACCTTGTTTGGTGAC AAAAACACCAAAAACGTGGTGTTGGAGAAGAGCTACAAAGAATACATGGAAGGCTTTAACGATATTGCTACTGGCCAAGC GCGTCGAGGTTTTGTTGATATCGTCAAAGAGCTGCAAGAACGCTTTCCAAACCCAGAAAATATTGAAAAAGAACAAGATA AAAAAGAGTTTGCCAAGCTGTTTGGTGAATACCTAAAAGCAGAAAATATTCTACAAAACTACGATGAGTTTGCTGGATTA AAAGCACTGCAAAGCCTAGATACCAGTGATGAACAAGCGGTTGAAGAGTTTAAGTCAAAGTACTATCTGGACGATGCTGA CATCGAGGCAATGCAAACCATCGATATGCCGAGCGAACGTGCTATCCAAGATTATCGCTCTACCTACAACGATACCCGCG ACTGGTTGCGACGCGATAAAGAAGGTCAGGATAAAGATAAGTCAACGGTAGACTGGGACGATGTGGTCTTTGAAATTGAT TTGCTTAAATCGCAAGAAATCAACCTCGATTACATTCTTGAACTGATTTTTGATCACAATAAGAAGAACAAGAGCAAAGA AGGCTTGATTGAAGAAGTTCGTCGTATGATCCGCGGTAGCCTTGGCAATAGAGCGAAAGAGAGCTTGGTGGTTGATTTTA TTAACCAGACAAACCTAGATGAGATCAATGACAAAGCCAGCATTATCGACGCTTTCTTCAAATTCGCCCAGGCGGAGCAG AAGCGCGAAGCCGATGCCATTATTGCCTCTGAAAAGCTCAATATCGATGCTGCCAAACGTTATATTGCATCATCACTCAA ACGTGAGTACGCCTCTGAAAATGGCACTGCTCTTAATGAGGCGCTGCCCAAACTTAGCCCATTGAACCCACAGTACCGAA CCCAGAAGCAAACGGTTTTTCAGAAAATTGCCGCTTTTGTTGAAAAATTCAAAGGTGTGGGTGGGCAGTTGTAG
Upstream 100 bases:
>100_bases CTCAGATAAAACCGGCCATTGGCAAGTAATTGAATAATGCGATGCAGTGGCTGGTTCCATTTTGGAAAACACCACGGCTA ACAAAAAAGGATGTAAACGA
Downstream 100 bases:
>100_bases TGATATGAAGAGCTCTTTTCACGTAGTTAATGCTTGATGAAAAGAGCTCGATATTTTTAAATTAGTGCTGTTTTTTTTCG AGATAGCAGATATGAATATT
Product: type I site-specific deoxyribonuclease, HsdR family
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1037_residues MTTYKAVAESNNFIVLDKYTKEWQVNESFQSEGDLERELIQDLSNQGYEYLSALTTPDAMLANVRKQLQALNKVEFTDAE WARFCEQYLNTPSDNILDKTRKVHSDYIFDFVFDDGHIENIYLFDKKTIARNKVQVIKQFEQTGSHANRYDVTILINGLP LVQIELKKRGVAIREAFNQIHRYSKESFNSDHSLYKFLQLFVISNGTDTRYFANTTKRDKNSFDFTMNWAKSDNTLIKDL KDFTATFFQKETLLEVILRYSVFDVSNTLLVMRPYQIAATERILWKIKSAFNAKNWSSTESGGYIWHTTGSGKTLTSFKA ARLATDLDCIDKVFFVVDRKDLDYQTMKEYQRFSPDSVNGSDSTAGLKSNLDKDDNKIVVTTIQKLNNLIKSESDLAIYN KQVVFIFDECHRSQFGEAQKNLKKKFKKYYQFGFTGTPIFPENALGAETTGSVFGQQLHTYVITDAIRDEKVLKFKVDYN DVRPQFKSIETEQDDKKLSAAENKKAFLHPMRIGEISQYILSHFNQKTHRAYSGAKGFNAMFAVSSVDAAKAYYETFKTL QAEAENGPTSKPLRIATIFSFAANEEQDAIGDILDESFEVSSMNSSAKEFLSAAIKDYNAMFKSNYGVDSNGFQNYYRDL AQRVKNQEIDLLIVVGMFLTGFDAPTLNTLFVDKNLRYHGLMQAFSRTNRIYDATKTFGNIVTFRDLEQATIDAITLFGD KNTKNVVLEKSYKEYMEGFNDIATGQARRGFVDIVKELQERFPNPENIEKEQDKKEFAKLFGEYLKAENILQNYDEFAGL KALQSLDTSDEQAVEEFKSKYYLDDADIEAMQTIDMPSERAIQDYRSTYNDTRDWLRRDKEGQDKDKSTVDWDDVVFEID LLKSQEINLDYILELIFDHNKKNKSKEGLIEEVRRMIRGSLGNRAKESLVVDFINQTNLDEINDKASIIDAFFKFAQAEQ KREADAIIASEKLNIDAAKRYIASSLKREYASENGTALNEALPKLSPLNPQYRTQKQTVFQKIAAFVEKFKGVGGQL
Sequences:
NA
Specific function: NA
COG id: COG0610
COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA