Definition Shewanella baltica OS223 chromosome, complete genome.
Accession NC_011663
Length 5,145,902

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The map label for this gene is yebU

Identifier: 217973073

GI number:

Start: 2237167

End: 2238684

Strand: Reverse

Name: yebU

Synonym: Sbal223_1896

Alternate gene names: NA

Gene position: NA

Preceding gene: 217973075

Following gene: 217973063

Centisome position: NA

GC content: NA

Gene sequence:

>1518_bases
ATGATATACTCGCGCCAGTTGATACACAGTCTATTTTCCTATGGTTCAATGAAATCAATGGTTCAATTAAATCAAAATTT
TATCGATACAATCACCCAAGAACTCCCCGCCCATTTATCCATGGACGAGTTTATTGCCGCCTGCGACAGGCCGCTTAGAC
GTTCAATTCGGGTCAATACCTTAAAAATCAGCAGCGACGACTTTAAGACTCTGATGCAACCTAAGGGCTGGACGTTCGAT
CCCATTCCTTGGTGTGAAGACGGATTTTGGATCAGTTACGATGAAGAAGAACAACTCGGCAATGCCTTAGAGCACATTCA
GGGCCTATTCTACATTCAAGAAGCTAGCTCTATGTTGCCACCAACCGCACTTTTTACGCCTAGTGCATTTACGACTAGTG
CAAAGTGGCAGTGCGTACTCGATCTCGCCTCTGCGCCGGGTTCAAAAACCACGCAAATGGCCGCATTGATGCAAAACCAA
GGTTTATTGGTGGCGAATGAGTATTCGGCGAGCCGCGTGAAAGTATTGCACGCCAATGTGCTGCGCATGGGCGCAAGTCA
CTGCGCTCTCACCCATTTCGATGGCCGTGTGTTTGGCGAATACCTATACGAAAGTTTCGATGCCGTGCTCATTGATGCGC
CCTGTGGCGGCGAAGGCACAGTGCGTAAAGACGTCGATGCGTTAAAACATTGGAGTCTTGACGATGTGTTGGCGATTAGC
GAAACCCAAAAAGCCTTAATCGAATCGGCGTTTCTCGCCCTGAAACCCGGCGGCAGTTTGGTCTACTCGACCTGCACCTT
AAACCGTCTCGAAAACCAAGGCGTGTGCGAGTATTTAAAACAAGTCTACGGCGATGCCGTGCAATTTGAATCCTTAAGTG
ATTTATTTGATGGCGCTGAGCGAGCCACGACTGCCGAAGGCTTCTTGCATGTCTGGCCGCAGATTTACGACAGTGAAGGT
TTCTTTGTCGCTAAATTGACAAAAACTGCCTCTGTGCCGCGGTTACAGCCAGAGCCTAAACTGCAGAAAAACTTCCCCTT
CACGCCCGCATCAGCGAAACAAGCACAAGGGATCAAAGACTATTTTCAGCAGGATTTAGGCATCAGCTTACCAGACGAAC
TCATCATGGTTCGCGATGATGAATTCTGGCTATTTCCACATGAATTCAACGCTTTTATCGGCCGTATGCGCTTTCAGCGT
ATTGGCATTAAACTCGCCGATAGCAGTAAGCACGGTTTTAAAGTCCGCCATGAAGCGATTATTGCTTTAGCGGGAAAACA
ACTTAGCCCAACGGCAAAAACGGTCGATGTGAGCGATGTTGAAGCCAAAGAGTATTTGATGGGGCGAGATATTCCCTTAG
CTACCGCAGACAAAGCCCAAGGTGAAGTGATCGTCTGTTATGGCGGCGCGCCGTTAGGCATGGCGAAACATTTAGGCAAT
AAGTTAAAAAACAACCTGCCCAGAGACTTAGTGAAAGATAAAGTGTTATTGCTACCAGAACAGACAAAATCGTTATAG

Upstream 100 bases:

>100_bases
GCGACTCATTCCATTATTGCGGCAATCGTCAGTGCATAAACCTCAAATCACCATAACGGCTGAGGCACTTGGGATAAAAT
CTCAGACCCAATAAGGGATT

Downstream 100 bases:

>100_bases
TTCTGCTGTTTTTTAGCGATAAATAACCTAAAAAAGGGGAAGGTGAACGCGACTCTAGGGCAAAAGCTCGACTACACTGA
GTCTATTGTAAAGCGCACTG

Product: rRNA (cytosine-C(5)-)-methyltransferase RsmF

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>505_residues
MIYSRQLIHSLFSYGSMKSMVQLNQNFIDTITQELPAHLSMDEFIAACDRPLRRSIRVNTLKISSDDFKTLMQPKGWTFD
PIPWCEDGFWISYDEEEQLGNALEHIQGLFYIQEASSMLPPTALFTPSAFTTSAKWQCVLDLASAPGSKTTQMAALMQNQ
GLLVANEYSASRVKVLHANVLRMGASHCALTHFDGRVFGEYLYESFDAVLIDAPCGGEGTVRKDVDALKHWSLDDVLAIS
ETQKALIESAFLALKPGGSLVYSTCTLNRLENQGVCEYLKQVYGDAVQFESLSDLFDGAERATTAEGFLHVWPQIYDSEG
FFVAKLTKTASVPRLQPEPKLQKNFPFTPASAKQAQGIKDYFQQDLGISLPDELIMVRDDEFWLFPHEFNAFIGRMRFQR
IGIKLADSSKHGFKVRHEAIIALAGKQLSPTAKTVDVSDVEAKEYLMGRDIPLATADKAQGEVIVCYGGAPLGMAKHLGN
KLKNNLPRDLVKDKVLLLPEQTKSL

Sequences:
NA

Specific function: NA

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA