| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21675085
Identifier: 21675085
GI number: 21675085
Start: 2143025
End: 2144032
Strand: Direct
Name: 21675085
Synonym: CT2279
Alternate gene names: NA
Gene position: 2143025-2144032 (Clockwise)
Preceding gene: 21675084
Following gene: 21675086
Centisome position: 99.45
GC content: 58.13
Gene sequence:
>1008_bases ATGTGCTTTTCAAGACCAGGCTACCTCTACCTTTTGTGGCTGCTCGTTCCGCTTGCGGTTCTGGTGTTCTATGGAGTTCG CCGGAAGCTCTCGGCTTGGGCAAAAATCGACTCCACAGGTGGAGGCTCAGGAATCTTGCCTGCCGTAAGCGTCAGGAAGC TTGGGCTCCGCAGGATTATGCTCCTGCTCTCCGCCGCGCTGATGATCGTGTCAATTGCTGGTCCGCAACTGTGCCGCGGC CAGAAAGCGGTGCGTCAGAAAGGAATCGATATCATTTTCATGCTCGATATTTCAAACTCCATGCTCGCGCGGGACACCGC TCCCGACCGGCTGACGCACGCCAAGACAGAGCTGCTTCAGATCAGCCGCCGCCTTGGCGATGGGCGAAAGGCGCTGCTAC TGTTTGCGGGAACACCCGTCGTGCAGTGCCCACTGACAGATGACGAGGAGGATTTCGAAATCCTGCTCGATATGGCGGCG CCAGAACTGATCACAACGCAGGGCACCGATTACCGCCGGGCATTCGACGCGGCACTGAAGCTTACGAATTCGGGGGGCGA ACTGTCGAGCAACGAAACCGTGCTGGTGCTGGCGAGCGACGGGGAAGACCACGGAAACGATCTTGGCGATATTGCCACAG CGATGAAAACACGAGGCGTGCATCTCCATGTGATCGGCGTCGGAGGAGTTCAGCCAGTGCCAATACCGATGCAGGGCGGG CCAAAACGTGACCAACAAGGAAAAATCGTCCTGACTTCGTTCAAACCTGAACCGCTTGCCAGTCTCATCAAGACGGCGAA GGGGAAATTCTACTACAGCCGTCCCGATGCACCGGTGCACGATGCCGTCGCTGACGACATTGCCGCCGAGGCCGCTGAGG CGAGATGGATCATGGCGCCAGAACAACGTGTGCCGGTGCACGGCGAGACCATCCTTGCCGCTTTACTGCTGTTCGTATCG GGGTCAATGATGACCGATGTTCGACGTCCGCCCAAACAAAGCGCCTGA
Upstream 100 bases:
>100_bases GTACCATGGCGCTGTATCCGTGGCTACTTTTGTCGGCGGTGTGCCTGCTGCTTGCAGAACAGGCTCTTTCGGCAACCCGT TTTATCAGGATTCCCTGACT
Downstream 100 bases:
>100_bases ACTTCCCCGACGGGGGATGCAAGAGCTGGCATCTTGTCCGAAAGATTGTTAAATTTCAAAAATACAGAGCTGTAGCGGCT CTGGGTGCCTCACTCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: BatB Protein; Aerotolerance-Related Membrane Protein; Von Willebrand Factor Type A Domain-Containing Protein; VWFA Superfamily Protein; TPR Repeat-Containing Protein; Batb Protein; Aerotolerance-Related Cytoplasmic Membrane Protein BatB; BatA Protein; BatB/BatC Protein; Protein Containing A Von Willebrand Factor Type A Domain
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MCFSRPGYLYLLWLLVPLAVLVFYGVRRKLSAWAKIDSTGGGSGILPAVSVRKLGLRRIMLLLSAALMIVSIAGPQLCRG QKAVRQKGIDIIFMLDISNSMLARDTAPDRLTHAKTELLQISRRLGDGRKALLLFAGTPVVQCPLTDDEEDFEILLDMAA PELITTQGTDYRRAFDAALKLTNSGGELSSNETVLVLASDGEDHGNDLGDIATAMKTRGVHLHVIGVGGVQPVPIPMQGG PKRDQQGKIVLTSFKPEPLASLIKTAKGKFYYSRPDAPVHDAVADDIAAEAAEARWIMAPEQRVPVHGETILAALLLFVS GSMMTDVRRPPKQSA
Sequences:
>Translated_335_residues MCFSRPGYLYLLWLLVPLAVLVFYGVRRKLSAWAKIDSTGGGSGILPAVSVRKLGLRRIMLLLSAALMIVSIAGPQLCRG QKAVRQKGIDIIFMLDISNSMLARDTAPDRLTHAKTELLQISRRLGDGRKALLLFAGTPVVQCPLTDDEEDFEILLDMAA PELITTQGTDYRRAFDAALKLTNSGGELSSNETVLVLASDGEDHGNDLGDIATAMKTRGVHLHVIGVGGVQPVPIPMQGG PKRDQQGKIVLTSFKPEPLASLIKTAKGKFYYSRPDAPVHDAVADDIAAEAAEARWIMAPEQRVPVHGETILAALLLFVS GSMMTDVRRPPKQSA >Mature_335_residues MCFSRPGYLYLLWLLVPLAVLVFYGVRRKLSAWAKIDSTGGGSGILPAVSVRKLGLRRIMLLLSAALMIVSIAGPQLCRG QKAVRQKGIDIIFMLDISNSMLARDTAPDRLTHAKTELLQISRRLGDGRKALLLFAGTPVVQCPLTDDEEDFEILLDMAA PELITTQGTDYRRAFDAALKLTNSGGELSSNETVLVLASDGEDHGNDLGDIATAMKTRGVHLHVIGVGGVQPVPIPMQGG PKRDQQGKIVLTSFKPEPLASLIKTAKGKFYYSRPDAPVHDAVADDIAAEAAEARWIMAPEQRVPVHGETILAALLLFVS GSMMTDVRRPPKQSA
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36201; Mature: 36201
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCFSRPGYLYLLWLLVPLAVLVFYGVRRKLSAWAKIDSTGGGSGILPAVSVRKLGLRRIM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHH LLLSAALMIVSIAGPQLCRGQKAVRQKGIDIIFMLDISNSMLARDTAPDRLTHAKTELLQ HHHHHHHHHHHCCCCHHHCCHHHHHHCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHH ISRRLGDGRKALLLFAGTPVVQCPLTDDEEDFEILLDMAAPELITTQGTDYRRAFDAALK HHHHHCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHE LTNSGGELSSNETVLVLASDGEDHGNDLGDIATAMKTRGVHLHVIGVGGVQPVPIPMQGG EECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCC PKRDQQGKIVLTSFKPEPLASLIKTAKGKFYYSRPDAPVHDAVADDIAAEAAEARWIMAP CCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCEEEECC EQRVPVHGETILAALLLFVSGSMMTDVRRPPKQSA CCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCC >Mature Secondary Structure MCFSRPGYLYLLWLLVPLAVLVFYGVRRKLSAWAKIDSTGGGSGILPAVSVRKLGLRRIM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHH LLLSAALMIVSIAGPQLCRGQKAVRQKGIDIIFMLDISNSMLARDTAPDRLTHAKTELLQ HHHHHHHHHHHCCCCHHHCCHHHHHHCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHH ISRRLGDGRKALLLFAGTPVVQCPLTDDEEDFEILLDMAAPELITTQGTDYRRAFDAALK HHHHHCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHE LTNSGGELSSNETVLVLASDGEDHGNDLGDIATAMKTRGVHLHVIGVGGVQPVPIPMQGG EECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCC PKRDQQGKIVLTSFKPEPLASLIKTAKGKFYYSRPDAPVHDAVADDIAAEAAEARWIMAP CCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCEEEECC EQRVPVHGETILAALLLFVSGSMMTDVRRPPKQSA CCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA