Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21675060

Identifier: 21675060

GI number: 21675060

Start: 2115704

End: 2115886

Strand: Reverse

Name: 21675060

Synonym: CT2252

Alternate gene names: NA

Gene position: 2115886-2115704 (Counterclockwise)

Preceding gene: 21675066

Following gene: 21675059

Centisome position: 98.19

GC content: 42.62

Gene sequence:

>183_bases
TTGATTTTCATAAAGATGAGTCTTTTGAACGACTTGCTGGAGAAGACTCTTTCCGAGATTTGGGAGATTATGCCATGGAA
TCTGGTTGACCAAATGGCGGAGAATTCGGAACTGATTGTTATCTCGATGTTCGAGGTCAGAAGGTGTTCGAAAAACGAGT
TTTGCGAAAATGAGCAGCGCTGA

Upstream 100 bases:

>100_bases
CCCTGTTTTTATATCGCTAAGTAGTTATATAATTGAGATTTTTGGCGTCTGGATGCGCTTGTCCATCTGCATCGCGGATG
GCGATTGAATCTGTAACCTG

Downstream 100 bases:

>100_bases
AATTCTCGATCATTGCCGGGGAATTGGGCATGAGTGGGGGCGGTTGCTACATTGTCCTGAAGCTAAGGGTTTCGTGCGGA
ACTCCGTGCTTGCTATTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MIFIKMSLLNDLLEKTLSEIWEIMPWNLVDQMAENSELIVISMFEVRRCSKNEFCENEQR

Sequences:

>Translated_60_residues
MIFIKMSLLNDLLEKTLSEIWEIMPWNLVDQMAENSELIVISMFEVRRCSKNEFCENEQR
>Mature_60_residues
MIFIKMSLLNDLLEKTLSEIWEIMPWNLVDQMAENSELIVISMFEVRRCSKNEFCENEQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7240; Mature: 7240

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
11.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
11.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFIKMSLLNDLLEKTLSEIWEIMPWNLVDQMAENSELIVISMFEVRRCSKNEFCENEQR
CEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIFIKMSLLNDLLEKTLSEIWEIMPWNLVDQMAENSELIVISMFEVRRCSKNEFCENEQR
CEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA