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The map label for this gene is atpD-2 [H]

Identifier: 21675043

GI number: 21675043

Start: 2097924

End: 2099312

Strand: Direct

Name: atpD-2 [H]

Synonym: CT2234

Alternate gene names: 21675043

Gene position: 2097924-2099312 (Clockwise)

Preceding gene: 21675038

Following gene: 21675044

Centisome position: 97.35

GC content: 58.24

Gene sequence:

>1389_bases
ATGCAAGAAGGTAAGATTTCCCAGATCATCGGCCCTGTCGTTGACGTTGACTTTCCTGAAGGACAGCTTCCGTCTATCCT
CGATGCCCTCACTGTCACCCGTCAGGACGGCTCGAAACTGGTACTCGAAACCCAGCAGCACCTTGGAGAGGAGCGTGTTC
GGACAATCGCCATGGAAGGGACCGACGGTCTGGTCAGAGGCATGAGCGCTGTCAACACCGGCAAACCGATCCAGGTCCCG
GTAGGCGGAGAGGTGCTCGGCAGAATGCTGAACGTTGTCGGCGATCCCATCGACGGCAAAGGCCCTGTCCCGGCAAAGAA
AACCTACTCTATCCATCGCGCCGCTCCGAAATTCGACGAACTTTCGACCAAAACCGAGATGTTCGAAACCGGCATCAAGG
TTATCGATCTCCTCGAGCCCTACTCCCGCGGTGGTAAAACCGGTCTGTTCGGCGGCGCTGGCGTCGGCAAGACCGTGCTC
ATCATGGAGCTGATCAACAATATCGCCAAGCAGCAGTCGGGTTACTCCGTGTTCGCTGGCGTCGGCGAGCGCACCCGTGA
AGGAAACGACCTCTGGCACGAGATGATGGAGTCTGGCGTTATCGACAAGACCGCTCTCGTGTTCGGCCAGATGAACGAGC
CTCCGGGAGCACGCGCACGCGTCGCCCTGACCGGCCTTAGCATCGCCGAGTACTTCCGTGAGGAAGAGGGCCGTGACGTG
CTTCTGTTCATCGACAACATCTTCCGCTTCACCCAGGCAGGTTCCGAGGTATCCGCGCTTCTTGGCCGTATGCCGAGCGC
CGTAGGCTACCAGCCGACTCTCAGCACCGAGATGGGTGAGCTTCAGGACAGGATCACCTCCACCAAGAAAGGTTCGGTTA
CCTCCGTGCAAGCCATCTACGTCCCTGCCGATGACCTTACCGATCCAGCTCCGGCTACCGCATTCACCCACCTCGATGCC
ACGACCGTGCTTTCACGTCAGATCGCCGAGCTTGGTATCTACCCGGCTGTCGATCCGCTTGATTCAACCTCCCGAATCCT
CGATCCGAACATCGTCGGTGACGATCACTACAACACCGCGCAGGCTGTCAAGCAGATTCTCCAGCGCTACAAAGACCTTC
AGGACATCATCGCCATTCTCGGTATGGACGAGCTGAGCGACGAGGACAAACTCGTGGTTGCCCGCGCCCGCAAAGTGCAG
CGCTTCCTGTCGCAGCCCTTTTTCGTGGCTGAAGCGTTTACCGGTCTTGCAGGCAAGTACGTCAAGCTCGAAGACACCAT
CAAGGGCTTCAAGGAGATCATCGATGGCCGTCACGACAACCTGCCCGAAGCTGCCTTCTACCTGGTCGGCACCATCGAAG
AGGCGGTTGCCAAAGCAAAAACGCTCTAA

Upstream 100 bases:

>100_bases
CGAGAACCCGAGCCGAGTAACCGGAACAGAGCCTGAAAAGGGAGTCTCGTGATTCCGGCACCAAACGTTTGATTGCAACC
AAAATCCCATACTGAATACC

Downstream 100 bases:

>100_bases
ACCAACGGCAAAGACATGGCAAGTTCAGACAAAGCCTTTACACTCGATATCGTCACGCCCCAGAAGCTCTTCTTTTCGGG
AGAGATCAACAGCGTCATCG

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta 1; F-ATPase subunit beta 1 [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MQEGKISQIIGPVVDVDFPEGQLPSILDALTVTRQDGSKLVLETQQHLGEERVRTIAMEGTDGLVRGMSAVNTGKPIQVP
VGGEVLGRMLNVVGDPIDGKGPVPAKKTYSIHRAAPKFDELSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVL
IMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFREEEGRDV
LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGELQDRITSTKKGSVTSVQAIYVPADDLTDPAPATAFTHLDA
TTVLSRQIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLVVARARKVQ
RFLSQPFFVAEAFTGLAGKYVKLEDTIKGFKEIIDGRHDNLPEAAFYLVGTIEEAVAKAKTL

Sequences:

>Translated_462_residues
MQEGKISQIIGPVVDVDFPEGQLPSILDALTVTRQDGSKLVLETQQHLGEERVRTIAMEGTDGLVRGMSAVNTGKPIQVP
VGGEVLGRMLNVVGDPIDGKGPVPAKKTYSIHRAAPKFDELSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVL
IMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFREEEGRDV
LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGELQDRITSTKKGSVTSVQAIYVPADDLTDPAPATAFTHLDA
TTVLSRQIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLVVARARKVQ
RFLSQPFFVAEAFTGLAGKYVKLEDTIKGFKEIIDGRHDNLPEAAFYLVGTIEEAVAKAKTL
>Mature_462_residues
MQEGKISQIIGPVVDVDFPEGQLPSILDALTVTRQDGSKLVLETQQHLGEERVRTIAMEGTDGLVRGMSAVNTGKPIQVP
VGGEVLGRMLNVVGDPIDGKGPVPAKKTYSIHRAAPKFDELSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVL
IMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFREEEGRDV
LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGELQDRITSTKKGSVTSVQAIYVPADDLTDPAPATAFTHLDA
TTVLSRQIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLVVARARKVQ
RFLSQPFFVAEAFTGLAGKYVKLEDTIKGFKEIIDGRHDNLPEAAFYLVGTIEEAVAKAKTL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=465, Percent_Identity=72.0430107526882, Blast_Score=681, Evalue=0.0,
Organism=Homo sapiens, GI19913428, Length=420, Percent_Identity=25.4761904761905, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI19913424, Length=328, Percent_Identity=28.0487804878049, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI19913426, Length=432, Percent_Identity=24.0740740740741, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI50345984, Length=299, Percent_Identity=26.7558528428094, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI4757810, Length=299, Percent_Identity=26.7558528428094, Blast_Score=102, Evalue=6e-22,
Organism=Escherichia coli, GI1790170, Length=463, Percent_Identity=69.7624190064795, Blast_Score=655, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=409, Percent_Identity=29.3398533007335, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1790172, Length=316, Percent_Identity=27.2151898734177, Blast_Score=114, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI25144756, Length=465, Percent_Identity=69.0322580645161, Blast_Score=660, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17570191, Length=423, Percent_Identity=25.0591016548463, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17510931, Length=368, Percent_Identity=25.2717391304348, Blast_Score=118, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17565854, Length=326, Percent_Identity=27.6073619631902, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71988080, Length=299, Percent_Identity=25.4180602006689, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71988063, Length=299, Percent_Identity=25.4180602006689, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71988074, Length=266, Percent_Identity=24.0601503759398, Blast_Score=83, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6322581, Length=458, Percent_Identity=70.0873362445415, Blast_Score=657, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=423, Percent_Identity=25.2955082742317, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6319370, Length=365, Percent_Identity=26.5753424657534, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6320016, Length=315, Percent_Identity=24.7619047619048, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24638766, Length=465, Percent_Identity=72.258064516129, Blast_Score=674, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=467, Percent_Identity=67.4518201284797, Blast_Score=630, Evalue=0.0,
Organism=Drosophila melanogaster, GI20129479, Length=343, Percent_Identity=27.4052478134111, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24583988, Length=342, Percent_Identity=27.1929824561404, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24583986, Length=342, Percent_Identity=27.1929824561404, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24583984, Length=342, Percent_Identity=27.1929824561404, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI281361666, Length=424, Percent_Identity=25, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24646341, Length=424, Percent_Identity=25, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI17136796, Length=424, Percent_Identity=25, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24583992, Length=329, Percent_Identity=27.355623100304, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24658560, Length=299, Percent_Identity=27.0903010033445, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24638768, Length=92, Percent_Identity=57.6086956521739, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 50126; Mature: 50126

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEGKISQIIGPVVDVDFPEGQLPSILDALTVTRQDGSKLVLETQQHLGEERVRTIAMEG
CCCCCHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHCHHHHHEEEECC
TDGLVRGMSAVNTGKPIQVPVGGEVLGRMLNVVGDPIDGKGPVPAKKTYSIHRAAPKFDE
CCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHH
LSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC
VGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFREEEGRDV
CCCCCCCCHHHHHHHHHCCCCCHHHHHEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCEE
LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGELQDRITSTKKGSVTSVQAIY
EEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEE
VPADDLTDPAPATAFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTA
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHH
QAVKQILQRYKDLQDIIAILGMDELSDEDKLVVARARKVQRFLSQPFFVAEAFTGLAGKY
HHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCE
VKLEDTIKGFKEIIDGRHDNLPEAAFYLVGTIEEAVAKAKTL
EEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQEGKISQIIGPVVDVDFPEGQLPSILDALTVTRQDGSKLVLETQQHLGEERVRTIAMEG
CCCCCHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHCHHHHHEEEECC
TDGLVRGMSAVNTGKPIQVPVGGEVLGRMLNVVGDPIDGKGPVPAKKTYSIHRAAPKFDE
CCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHH
LSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC
VGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFREEEGRDV
CCCCCCCCHHHHHHHHHCCCCCHHHHHEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCEE
LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGELQDRITSTKKGSVTSVQAIY
EEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEE
VPADDLTDPAPATAFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTA
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHH
QAVKQILQRYKDLQDIIAILGMDELSDEDKLVVARARKVQRFLSQPFFVAEAFTGLAGKY
HHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCE
VKLEDTIKGFKEIIDGRHDNLPEAAFYLVGTIEEAVAKAKTL
EEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA