| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21675039
Identifier: 21675039
GI number: 21675039
Start: 2093087
End: 2094484
Strand: Reverse
Name: 21675039
Synonym: CT2230
Alternate gene names: NA
Gene position: 2094484-2093087 (Counterclockwise)
Preceding gene: 21675040
Following gene: 21675036
Centisome position: 97.19
GC content: 58.94
Gene sequence:
>1398_bases ATGATTCGAAAAACCGCATGTTCGGTTGTGGCCCTTCTCGTGCTGCTCGGCGCCACCCCTGCGTTCGCCACCAATGGCAT GAACCTCGAAGGGTATGGCGCCAAATCGATGGCCATGGGCGGCACCGGCTCAGCCTACGATACGGGCAACTCCGCCGTCA TGAACAACCCGGCAACTCTCGGCTTCATGAAAGAGGGGGAGTCTGAGATCGGCTTCGGCATCCGGGGTCTGCATCCGAAC ATCAAGCTGGAGAACGGCGGTGCGAGCGACAAATCGGACGCGACCTCGTTCTTCATGCCCTCGATGTCCTATATGCGCCG CGATGGCCGGTTCAGCTATGGCGTCGCCATGCTCGCCCAGGGCGGCATGGGCACCGATTACGGCGACGATTCTCCGCTGT TCTCTATGGGGACATCGCTGAAGGGCGCTGCTGGTGTTTCAATGAGCGGCAAGGACATCCGGAGCGAGGTCGGTGTCGGA CGCATCATGTTTCCGGTGGCCTATCACCTGACCGACCAGACCACCCTCGGCGCATCGTTCGACGTCGTGATCGCCAGCAT GGATTTGCAGATGGACATGGATGGGCAGCACCTAGCCGGCATGATGGCCGGTAACGGAGGTTCCATCAGTGGTTCTATGG CAAGCTCGCTGGGAGCCATTATCGAGAGCGGTGCCGACATCAATTACGCCCGGTTCGACTTCTCGAACCACAATCCTTTC ATCGGAAAAGCGGTGGGATTCGGCACCGGCCTGAAGTTCGGCTTCACCCACCAGTTCAGCAAAGTCGTGTCCGTCGGCGC GAGCTGTCACACCCAGACCAAGCTTGCCGATCTCGAAACCGACAAGGCAACCCTTTCGTTTGCCGGAGATTTTGGTGAGC AGTCAGTGACCGGTAAAATCAAGGTGCGTAACTTCGAGTGGCCAGCGACTTTCGCTGCCGGAATAGCACTCAATCCCTCG GACAAATGGATGATCGCCGGCGATGTGAAATACATTGACTGGTCAAGCGTCATGGACAAATTCCAGATGAGCTTTATCGC CGACGGCTCGAATCCCGCTCCGTTTGCCGGGCAGAATCTCGACGTTACGATGGATCAGAAGTGGAAAGATCAGACGGTCT GGTCGCTCGGCGTGCAGTACAAGGCCACCGACAAGCTCGCCCTGCGCGCGGGTGCCAGCTTCTCGACCAACCCGGTGCCC GACAGCAACCTCAATCCGCTTTTCCCGGCGATTACGAAAAACCACTACACCTGCGGCTTCGGCTATCGCGTGAACGACGC CACAAGCGTCTCTGCCGCATTCAGCTGGGCGCCCAAAGTCACGGCCACCAACGGCGACCAGACCGTGATCTCCCACAGCC AGACCAACTGGGCTCTCAATCTCACGCACAGGCTGTGA
Upstream 100 bases:
>100_bases TACTCCGGATATAATCAACCCGGCTATCCCTCGTATCCTTCAAGGTTTTCCATAGATATGGAGCTGGCCGCAAGCATCTA ACATTCAACTCACTGACATC
Downstream 100 bases:
>100_bases GGAGATGTTGATCGGTAAAATAGAACGAGGGGGGAGTCTCCCTCTCAGTAGAGAATGTTAAGCCTTGTGTGATGATGGTA TAAACGCAGAAAGACTGCCT
Product: toluene transport protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MIRKTACSVVALLVLLGATPAFATNGMNLEGYGAKSMAMGGTGSAYDTGNSAVMNNPATLGFMKEGESEIGFGIRGLHPN IKLENGGASDKSDATSFFMPSMSYMRRDGRFSYGVAMLAQGGMGTDYGDDSPLFSMGTSLKGAAGVSMSGKDIRSEVGVG RIMFPVAYHLTDQTTLGASFDVVIASMDLQMDMDGQHLAGMMAGNGGSISGSMASSLGAIIESGADINYARFDFSNHNPF IGKAVGFGTGLKFGFTHQFSKVVSVGASCHTQTKLADLETDKATLSFAGDFGEQSVTGKIKVRNFEWPATFAAGIALNPS DKWMIAGDVKYIDWSSVMDKFQMSFIADGSNPAPFAGQNLDVTMDQKWKDQTVWSLGVQYKATDKLALRAGASFSTNPVP DSNLNPLFPAITKNHYTCGFGYRVNDATSVSAAFSWAPKVTATNGDQTVISHSQTNWALNLTHRL
Sequences:
>Translated_465_residues MIRKTACSVVALLVLLGATPAFATNGMNLEGYGAKSMAMGGTGSAYDTGNSAVMNNPATLGFMKEGESEIGFGIRGLHPN IKLENGGASDKSDATSFFMPSMSYMRRDGRFSYGVAMLAQGGMGTDYGDDSPLFSMGTSLKGAAGVSMSGKDIRSEVGVG RIMFPVAYHLTDQTTLGASFDVVIASMDLQMDMDGQHLAGMMAGNGGSISGSMASSLGAIIESGADINYARFDFSNHNPF IGKAVGFGTGLKFGFTHQFSKVVSVGASCHTQTKLADLETDKATLSFAGDFGEQSVTGKIKVRNFEWPATFAAGIALNPS DKWMIAGDVKYIDWSSVMDKFQMSFIADGSNPAPFAGQNLDVTMDQKWKDQTVWSLGVQYKATDKLALRAGASFSTNPVP DSNLNPLFPAITKNHYTCGFGYRVNDATSVSAAFSWAPKVTATNGDQTVISHSQTNWALNLTHRL >Mature_465_residues MIRKTACSVVALLVLLGATPAFATNGMNLEGYGAKSMAMGGTGSAYDTGNSAVMNNPATLGFMKEGESEIGFGIRGLHPN IKLENGGASDKSDATSFFMPSMSYMRRDGRFSYGVAMLAQGGMGTDYGDDSPLFSMGTSLKGAAGVSMSGKDIRSEVGVG RIMFPVAYHLTDQTTLGASFDVVIASMDLQMDMDGQHLAGMMAGNGGSISGSMASSLGAIIESGADINYARFDFSNHNPF IGKAVGFGTGLKFGFTHQFSKVVSVGASCHTQTKLADLETDKATLSFAGDFGEQSVTGKIKVRNFEWPATFAAGIALNPS DKWMIAGDVKYIDWSSVMDKFQMSFIADGSNPAPFAGQNLDVTMDQKWKDQTVWSLGVQYKATDKLALRAGASFSTNPVP DSNLNPLFPAITKNHYTCGFGYRVNDATSVSAAFSWAPKVTATNGDQTVISHSQTNWALNLTHRL
Specific function: Unknown
COG id: COG2067
COG function: function code I; Long-chain fatty acid transport protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005017 [H]
Pfam domain/function: PF03349 Toluene_X [H]
EC number: NA
Molecular weight: Translated: 49260; Mature: 49260
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKTACSVVALLVLLGATPAFATNGMNLEGYGAKSMAMGGTGSAYDTGNSAVMNNPATL CCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCEE GFMKEGESEIGFGIRGLHPNIKLENGGASDKSDATSFFMPSMSYMRRDGRFSYGVAMLAQ EEEECCCCHHCCCEECCCCCEEECCCCCCCCCCCHHEECCCHHHHHCCCCEEECCCEEEC GGMGTDYGDDSPLFSMGTSLKGAAGVSMSGKDIRSEVGVGRIMFPVAYHLTDQTTLGASF CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEEECCCCCCCCCE DVVIASMDLQMDMDGQHLAGMMAGNGGSISGSMASSLGAIIESGADINYARFDFSNHNPF EEEEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCC IGKAVGFGTGLKFGFTHQFSKVVSVGASCHTQTKLADLETDKATLSFAGDFGEQSVTGKI EEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCEEEEEECCCCCCCEEEEE KVRNFEWPATFAAGIALNPSDKWMIAGDVKYIDWSSVMDKFQMSFIADGSNPAPFAGQNL EEEEECCCCCEEECEEECCCCCEEEECCEEEEEHHHHHHHHEEEEEECCCCCCCCCCCCE DVTMDQKWKDQTVWSLGVQYKATDKLALRAGASFSTNPVPDSNLNPLFPAITKNHYTCGF EEEECCCCCCCEEEEECEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCEEEEC GYRVNDATSVSAAFSWAPKVTATNGDQTVISHSQTNWALNLTHRL CEEECCCCEEEEEEECCCCEEECCCCCEEEEECCCCEEEEEEECC >Mature Secondary Structure MIRKTACSVVALLVLLGATPAFATNGMNLEGYGAKSMAMGGTGSAYDTGNSAVMNNPATL CCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCEE GFMKEGESEIGFGIRGLHPNIKLENGGASDKSDATSFFMPSMSYMRRDGRFSYGVAMLAQ EEEECCCCHHCCCEECCCCCEEECCCCCCCCCCCHHEECCCHHHHHCCCCEEECCCEEEC GGMGTDYGDDSPLFSMGTSLKGAAGVSMSGKDIRSEVGVGRIMFPVAYHLTDQTTLGASF CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEEECCCCCCCCCE DVVIASMDLQMDMDGQHLAGMMAGNGGSISGSMASSLGAIIESGADINYARFDFSNHNPF EEEEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCC IGKAVGFGTGLKFGFTHQFSKVVSVGASCHTQTKLADLETDKATLSFAGDFGEQSVTGKI EEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCEEEEEECCCCCCCEEEEE KVRNFEWPATFAAGIALNPSDKWMIAGDVKYIDWSSVMDKFQMSFIADGSNPAPFAGQNL EEEEECCCCCEEECEEECCCCCEEEECCEEEEEHHHHHHHHEEEEEECCCCCCCCCCCCE DVTMDQKWKDQTVWSLGVQYKATDKLALRAGASFSTNPVPDSNLNPLFPAITKNHYTCGF EEEECCCCCCCEEEEECEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCEEEEC GYRVNDATSVSAAFSWAPKVTATNGDQTVISHSQTNWALNLTHRL CEEECCCCEEEEEEECCCCEEECCCCCEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8448205 [H]