| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is pgk [H]
Identifier: 21675031
GI number: 21675031
Start: 2088304
End: 2089497
Strand: Reverse
Name: pgk [H]
Synonym: CT2222
Alternate gene names: 21675031
Gene position: 2089497-2088304 (Counterclockwise)
Preceding gene: 21675032
Following gene: 21675030
Centisome position: 96.96
GC content: 59.88
Gene sequence:
>1194_bases ATGCAGAAAAAGACATTGTCTGACATATCGTTACAAGGAAAACGCGTCCTGATGCGAGTCGATTTCAACGTGCCGCTCGA CCAGGACAGGAACATCACTGACGAGAAAAGGATCGTGGAGGCACTGCCTTCAATCCGCAAGGTCATCGACAATGGCGGCA GGCTGATTCTGATGTCGCACCTCGGAAGACCGAAAGGCAAGGTCAACCCGGCATTCTCCCTTTCACCGGTCGCAAAGCGC CTCTCCGAGCTGCTTGATTGCCCGGTGACGATGGCTGGTGACTGCATCGGCACCGAGGTGATGCAGCAGGTGCTCGCCTT GCAGGACGGTGACGTGCTCATGCTCGAAAACCTCCGCTTCCACCCCGAAGAGGAGGCTAATGATCCTGACTTCGCCAGGG AGCTGGCTTCGCTGGGCGAAATCTACGTCAACGACGCATTCGGTACGGCGCACCGCGCCCACGCCTCGACCGAGGGCATC ACCCACTTCATGCAGACCGCCGTTGCGGGCTACCTCATCGAAAAGGAGCTGCGCTATCTCGGTACGGCGCTCAACGATGC ACAGCGTCCGTTCGTGGCCATTCTCGGCGGCGCGAAGATTTCAGGCAAGATCGACGTGCTCGAAAGCCTCTTCGAGAAAG TCGATACCGTTCTTGTCGGCGGCGCGATGGTCTTCACCTTCTTTAAGGCTCAGGGCCTCGACGTTGGCAACTCGCTTGTC GAAGAAAACAAGCTCGAACTGGCTGTTTCCCTGCTTGAAAAAGCCAAAGCGAAAAACGTGCGCTTGCTTCTTCCGGAAGA CGTGGTCGTGGCCGGAGAGATTTCCGCCGACGCGCCTTCGCGTGTCGAGCCGGTCAGCGCCATCTCCGCAGGCATGATTG GTCTCGACATCGGCCCGGCAACCATCGAAACCTACCGCAAGGAAATTCTCGACGCGAAAACCGTGCTCTGGAATGGCCCG ATGGGTGTGTTCGAGATCGACCAGTTCGCCAGGGGCACCTTCGCCGTCGCCCAGGCGCTTGCCGACGCAACCGCAGAGGG CGCGATCACCATCATCGGCGGCGGCGACTCGGCGGCGGCCATCGCAAAGGCTGGCCTCTCCGACAAGGTGACGCACGTTT CGACCGGCGGTGGCGCCAGCCTCGAATTCCTCGAAGGCAAGGAGCTGCCGGGCATCGCAGCCCTGAACGATTAG
Upstream 100 bases:
>100_bases CACGCCTTGACGAATCGCTCCGGGTATACCGCGGATGCCGGATATTATGTATATTCACGCAGGCAAACACTTTTAGTTTC ATCAACCAACTGACAGGGAA
Downstream 100 bases:
>100_bases ACCCTGACGAGCATTGATCGTCACGCAAGCGATTTCCGAACCGTATGAACAATCATGGGCGCGTCTGAGAAACGGCTCGA CACCGGTCAGCATGTTTTCC
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MQKKTLSDISLQGKRVLMRVDFNVPLDQDRNITDEKRIVEALPSIRKVIDNGGRLILMSHLGRPKGKVNPAFSLSPVAKR LSELLDCPVTMAGDCIGTEVMQQVLALQDGDVLMLENLRFHPEEEANDPDFARELASLGEIYVNDAFGTAHRAHASTEGI THFMQTAVAGYLIEKELRYLGTALNDAQRPFVAILGGAKISGKIDVLESLFEKVDTVLVGGAMVFTFFKAQGLDVGNSLV EENKLELAVSLLEKAKAKNVRLLLPEDVVVAGEISADAPSRVEPVSAISAGMIGLDIGPATIETYRKEILDAKTVLWNGP MGVFEIDQFARGTFAVAQALADATAEGAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND
Sequences:
>Translated_397_residues MQKKTLSDISLQGKRVLMRVDFNVPLDQDRNITDEKRIVEALPSIRKVIDNGGRLILMSHLGRPKGKVNPAFSLSPVAKR LSELLDCPVTMAGDCIGTEVMQQVLALQDGDVLMLENLRFHPEEEANDPDFARELASLGEIYVNDAFGTAHRAHASTEGI THFMQTAVAGYLIEKELRYLGTALNDAQRPFVAILGGAKISGKIDVLESLFEKVDTVLVGGAMVFTFFKAQGLDVGNSLV EENKLELAVSLLEKAKAKNVRLLLPEDVVVAGEISADAPSRVEPVSAISAGMIGLDIGPATIETYRKEILDAKTVLWNGP MGVFEIDQFARGTFAVAQALADATAEGAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND >Mature_397_residues MQKKTLSDISLQGKRVLMRVDFNVPLDQDRNITDEKRIVEALPSIRKVIDNGGRLILMSHLGRPKGKVNPAFSLSPVAKR LSELLDCPVTMAGDCIGTEVMQQVLALQDGDVLMLENLRFHPEEEANDPDFARELASLGEIYVNDAFGTAHRAHASTEGI THFMQTAVAGYLIEKELRYLGTALNDAQRPFVAILGGAKISGKIDVLESLFEKVDTVLVGGAMVFTFFKAQGLDVGNSLV EENKLELAVSLLEKAKAKNVRLLLPEDVVVAGEISADAPSRVEPVSAISAGMIGLDIGPATIETYRKEILDAKTVLWNGP MGVFEIDQFARGTFAVAQALADATAEGAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=415, Percent_Identity=45.5421686746988, Blast_Score=352, Evalue=5e-97, Organism=Homo sapiens, GI31543397, Length=415, Percent_Identity=43.855421686747, Blast_Score=345, Evalue=3e-95, Organism=Escherichia coli, GI1789294, Length=394, Percent_Identity=43.4010152284264, Blast_Score=300, Evalue=1e-82, Organism=Caenorhabditis elegans, GI17508823, Length=414, Percent_Identity=47.1014492753623, Blast_Score=366, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6319857, Length=412, Percent_Identity=47.5728155339806, Blast_Score=364, Evalue=1e-101, Organism=Drosophila melanogaster, GI24581203, Length=417, Percent_Identity=47.0023980815348, Blast_Score=357, Evalue=6e-99, Organism=Drosophila melanogaster, GI17136394, Length=413, Percent_Identity=46.0048426150121, Blast_Score=334, Evalue=7e-92,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 42290; Mature: 42290
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKTLSDISLQGKRVLMRVDFNVPLDQDRNITDEKRIVEALPSIRKVIDNGGRLILMSH CCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEC LGRPKGKVNPAFSLSPVAKRLSELLDCPVTMAGDCIGTEVMQQVLALQDGDVLMLENLRF CCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHCCCCCEEEECCCCC HPEEEANDPDFARELASLGEIYVNDAFGTAHRAHASTEGITHFMQTAVAGYLIEKELRYL CCCCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GTALNDAQRPFVAILGGAKISGKIDVLESLFEKVDTVLVGGAMVFTFFKAQGLDVGNSLV HHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH EENKLELAVSLLEKAKAKNVRLLLPEDVVVAGEISADAPSRVEPVSAISAGMIGLDIGPA HHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHCCEEEECCCHH TIETYRKEILDAKTVLWNGPMGVFEIDQFARGTFAVAQALADATAEGAITIIGGGDSAAA HHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH IAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND HHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MQKKTLSDISLQGKRVLMRVDFNVPLDQDRNITDEKRIVEALPSIRKVIDNGGRLILMSH CCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEC LGRPKGKVNPAFSLSPVAKRLSELLDCPVTMAGDCIGTEVMQQVLALQDGDVLMLENLRF CCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHCCCCCEEEECCCCC HPEEEANDPDFARELASLGEIYVNDAFGTAHRAHASTEGITHFMQTAVAGYLIEKELRYL CCCCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GTALNDAQRPFVAILGGAKISGKIDVLESLFEKVDTVLVGGAMVFTFFKAQGLDVGNSLV HHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH EENKLELAVSLLEKAKAKNVRLLLPEDVVVAGEISADAPSRVEPVSAISAGMIGLDIGPA HHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHCCEEEECCCHH TIETYRKEILDAKTVLWNGPMGVFEIDQFARGTFAVAQALADATAEGAITIIGGGDSAAA HHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH IAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND HHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA