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The map label for this gene is xseB

Identifier: 21675023

GI number: 21675023

Start: 2083559

End: 2083846

Strand: Direct

Name: xseB

Synonym: CT2214

Alternate gene names: 21675023

Gene position: 2083559-2083846 (Clockwise)

Preceding gene: 21675017

Following gene: 21675026

Centisome position: 96.69

GC content: 60.42

Gene sequence:

>288_bases
ATGCCCGCTTCAAGCAAATCCCGCACAAGTGCCGTGCCGACCATCGAAGAGCTGATCCAGCGCCTCGAAGAGATCACCCG
GAACATCGAAAACCCGGACACCGGGCTTGAAAACTCCATCGCGCTTTACGAGGAGGGAATGTCGCTCGCCGAGGAGTGCC
GTAAGCGCTTGCTGGAGACCCGCAAGAAGCTTGAAACGATCAACCCCGCCGAGACCGCCCGGCCCGCCAAACCTGAAAAC
GCTCCCGAAAGCCCCCGCATGAACGATCTGTTCGGCACGGAGAGCTGA

Upstream 100 bases:

>100_bases
CCGAGATTTTCGCACTATCGACAAACTTCACGCTTCCGTCCTTTTTGTAATAATCGCTATCGTTACCTATGTTACTCTCA
ATTTTAAACCAGACCGACCG

Downstream 100 bases:

>100_bases
CGAGTCAACCCTGCTCAGGCGTCGAGCATCGACCTCAGAATATCGTTCACCATTTTCGGGTTCGCCTTGCCCTTCATCTT
CTGCATACATTGGCCGACGA

Product: exodeoxyribonuclease, small subunit

Products: NA

Alternate protein names: Exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MPASSKSRTSAVPTIEELIQRLEEITRNIENPDTGLENSIALYEEGMSLAEECRKRLLETRKKLETINPAETARPAKPEN
APESPRMNDLFGTES

Sequences:

>Translated_95_residues
MPASSKSRTSAVPTIEELIQRLEEITRNIENPDTGLENSIALYEEGMSLAEECRKRLLETRKKLETINPAETARPAKPEN
APESPRMNDLFGTES
>Mature_94_residues
PASSKSRTSAVPTIEELIQRLEEITRNIENPDTGLENSIALYEEGMSLAEECRKRLLETRKKLETINPAETARPAKPENA
PESPRMNDLFGTES

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EX7S_CHLTE (Q8KAE9)

Other databases:

- EMBL:   AE006470
- RefSeq:   NP_663088.1
- ProteinModelPortal:   Q8KAE9
- SMR:   Q8KAE9
- GeneID:   1007345
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT2214
- NMPDR:   fig|194439.1.peg.2182
- TIGR:   CT2214
- HOGENOM:   HBG728416
- OMA:   PDTGLEN
- ProtClustDB:   CLSK638120
- BioCyc:   CTEP194439:CT_2214-MONOMER
- BRENDA:   3.1.11.6
- GO:   GO:0005737
- HAMAP:   MF_00337
- InterPro:   IPR003761
- PIRSF:   PIRSF006488
- ProDom:   PD028235

Pfam domain/function: PF02609 Exonuc_VII_S

EC number: =3.1.11.6

Molecular weight: Translated: 10643; Mature: 10512

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASSKSRTSAVPTIEELIQRLEEITRNIENPDTGLENSIALYEEGMSLAEECRKRLLET
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RKKLETINPAETARPAKPENAPESPRMNDLFGTES
HHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PASSKSRTSAVPTIEELIQRLEEITRNIENPDTGLENSIALYEEGMSLAEECRKRLLET
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RKKLETINPAETARPAKPENAPESPRMNDLFGTES
HHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901