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The map label for this gene is rfbC [H]

Identifier: 21675018

GI number: 21675018

Start: 2079666

End: 2080523

Strand: Reverse

Name: rfbC [H]

Synonym: CT2209

Alternate gene names: 21675018

Gene position: 2080523-2079666 (Counterclockwise)

Preceding gene: 21675019

Following gene: 21675016

Centisome position: 96.55

GC content: 62.94

Gene sequence:

>858_bases
ATGAATGGCGGAAAAACTGCGGTCATTGTGCTGGGCTGGAACGGTGCAGCCGATACCCTCGCCTGCCTGGCCTCACTCGC
GAAGGTGCGGCAGCCAGCGTTTACGGTCATTCTGGCGGACAACGGTTCTACCGATGGCACGGTGGGCCTCGTTCGCCAGG
CGTTTCCGGAGGTCGAGATTCTCGAGCTTGGGCGCAACCTCGGCTTCGCAGCCGGCAACAACGCGGCATTCCGTTCTCTG
CGCGGGCGCGGCTTTGACCGCGTGGTGTTCCTGAACAACGACACCGTCGTCGATCCCGGTTTTCTCCAGCCTCTGCTCGA
CGAACTGCAAAAGCCGTGGGTAGGCATTGCCGCGCCGAAAATTCTCTACATGGACGATCCGGGGCGCATCTGGTACGCGG
GCGGCGTGCTCGAATCAGCGACCGGGCTGATTGAGCACACCGGTATTCGCCAGCCTGACGGGCCGCGCTTCGATACGCCG
GAGCCGGTCTGGTACGCCACCGGTTGCTGCCTGGCAATGAGGTGCCGCGTGTTCGAGGAGGTCGGTGGTTTTGACGAGCG
GTTCCGGATGTACGGCGAGGATGTCGATCTCTCGATGAAGGTGCGCGAGCGCGGCCTCATCGTCATGTACCAGCCCGCGT
CGCGTATCTGGCATCGCGTTTCGGCTTCCTCCGGCGGCGAGATGAACCTCGGCAAGCAGCTCCGTAAAAGCGGTGCGGCG
ATGATGCTGTTCGCCAAGCACGGCATGATCGGCGGCCTTGTGCTCTATCCGCTGCTTCTGCCCTTCCGCGCGCTGCTCGG
TCTGCTGCGCTTCCAGTTTTTCAGGTGGACGTCATCGCAAGAGCGGGAAGAGGCATGA

Upstream 100 bases:

>100_bases
CGCTGGAGGAGGGCATCAGCGACTTCCGCCGCCGCAATTCGTGGCGCGAATTCGCTTCGCAAGCTGCGACTTTTCTGGAA
ACGTGCAGCCGGAGATCGGC

Downstream 100 bases:

>100_bases
CGCGCGGCCAGGAGTTTCGGACGGTCGTTGATGGCGCTTGGAGCGCTGACCCGGCCCACCGGATGCGGTGGGAGATGAGT
TTGGCATTCGTCGCGGCGTC

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MNGGKTAVIVLGWNGAADTLACLASLAKVRQPAFTVILADNGSTDGTVGLVRQAFPEVEILELGRNLGFAAGNNAAFRSL
RGRGFDRVVFLNNDTVVDPGFLQPLLDELQKPWVGIAAPKILYMDDPGRIWYAGGVLESATGLIEHTGIRQPDGPRFDTP
EPVWYATGCCLAMRCRVFEEVGGFDERFRMYGEDVDLSMKVRERGLIVMYQPASRIWHRVSASSGGEMNLGKQLRKSGAA
MMLFAKHGMIGGLVLYPLLLPFRALLGLLRFQFFRWTSSQEREEA

Sequences:

>Translated_285_residues
MNGGKTAVIVLGWNGAADTLACLASLAKVRQPAFTVILADNGSTDGTVGLVRQAFPEVEILELGRNLGFAAGNNAAFRSL
RGRGFDRVVFLNNDTVVDPGFLQPLLDELQKPWVGIAAPKILYMDDPGRIWYAGGVLESATGLIEHTGIRQPDGPRFDTP
EPVWYATGCCLAMRCRVFEEVGGFDERFRMYGEDVDLSMKVRERGLIVMYQPASRIWHRVSASSGGEMNLGKQLRKSGAA
MMLFAKHGMIGGLVLYPLLLPFRALLGLLRFQFFRWTSSQEREEA
>Mature_285_residues
MNGGKTAVIVLGWNGAADTLACLASLAKVRQPAFTVILADNGSTDGTVGLVRQAFPEVEILELGRNLGFAAGNNAAFRSL
RGRGFDRVVFLNNDTVVDPGFLQPLLDELQKPWVGIAAPKILYMDDPGRIWYAGGVLESATGLIEHTGIRQPDGPRFDTP
EPVWYATGCCLAMRCRVFEEVGGFDERFRMYGEDVDLSMKVRERGLIVMYQPASRIWHRVSASSGGEMNLGKQLRKSGAA
MMLFAKHGMIGGLVLYPLLLPFRALLGLLRFQFFRWTSSQEREEA

Specific function: Involved in O-antigen biosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00534 Glycos_transf_1; PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 31389; Mature: 31389

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGGKTAVIVLGWNGAADTLACLASLAKVRQPAFTVILADNGSTDGTVGLVRQAFPEVEI
CCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCHHH
LELGRNLGFAAGNNAAFRSLRGRGFDRVVFLNNDTVVDPGFLQPLLDELQKPWVGIAAPK
HHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEECCHHHHHHHHHHHCCCEEECCCE
ILYMDDPGRIWYAGGVLESATGLIEHTGIRQPDGPRFDTPEPVWYATGCCLAMRCRVFEE
EEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VGGFDERFRMYGEDVDLSMKVRERGLIVMYQPASRIWHRVSASSGGEMNLGKQLRKSGAA
HCCHHHHHHHCCCCCCEEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHCCCE
MMLFAKHGMIGGLVLYPLLLPFRALLGLLRFQFFRWTSSQEREEA
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNGGKTAVIVLGWNGAADTLACLASLAKVRQPAFTVILADNGSTDGTVGLVRQAFPEVEI
CCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCHHH
LELGRNLGFAAGNNAAFRSLRGRGFDRVVFLNNDTVVDPGFLQPLLDELQKPWVGIAAPK
HHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEECCHHHHHHHHHHHCCCEEECCCE
ILYMDDPGRIWYAGGVLESATGLIEHTGIRQPDGPRFDTPEPVWYATGCCLAMRCRVFEE
EEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VGGFDERFRMYGEDVDLSMKVRERGLIVMYQPASRIWHRVSASSGGEMNLGKQLRKSGAA
HCCHHHHHHHCCCCCCEEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHCCCE
MMLFAKHGMIGGLVLYPLLLPFRALLGLLRFQFFRWTSSQEREEA
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]